SIB BLAST network server version 1.6 of November 26, 2002 compiled by GNU C version 3.2.3 20030502 (Red Hat Linux 3.2.3-49) compiled on Feb 1 2005. Welcome to the SIB BLAST Network Service (noko01) ============================================================================== Swiss Institute of Bioinformatics (SIB) Ludwig Institute for Cancer Research (LICR) Swiss Institute for Experimental Cancer Research (ISREC) ============================================================================== If results of this search are reported or published, please mention that the computation was performed at the SIB using the BLAST network service. PEPTIDE SEQUENCE DATABASES swiss SwissProt + updates 14-Jul-2004 swisstrembl SwissProt+Trembl+TrUpdates 14-Jul-2004 nr Non-redundant SP+Trembl+TrUpdates+gp 14-Jul-2004 shuffled SwissProt r30 shuffled in windows of 20 aa yeast S.cerevisiae translated genome ORFs NUCLEOTIDE SEQUENCE DATABASES embre * EMBL Data Library, Release 79, June 2004 embu * EmblUpdate 14-Jul-2004 embl * EMBL+EmblUpdate 14-Jul-2004 nr * Synonym to embl (and actually redundant). 14-Jul-2004 EST Database of Expressed Sequence Tags 14-Jul-2004 GSS Genome Survey Sequences 14-Jul-2004 HTG High-thruput Genomic Sequences 14-Jul-2004 STS Database of Sequence Tagged Sites 14-Jul-2004 repbase Repbase, August 04, 2002 simple Simple sequence repeats (J. Mol. Evol. 40:120, 1995) yeast S.cerevisiae genome worm C.elegans genome * The est, gss, htg, and sts divisions of EMBL are excluded from these databases. ============================================================================ The BLAST Network Service uses a server developed at SIB and the NCBI BLAST 2 software. For problems regarding this site, please contact one of the following persons: - problems with the programs: Christian Iseli (Christian.Iseli@licr.org) Giovanna Ambrosini (giovanna.ambrosini@isb-sib.ch) - problems with the databases: Victor Jongeneel (Victor.Jongeneel@isb-sib.ch) Laurent Falquet (Laurent.Falquet@isrec.unil.ch) ============================================================================ BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= consensus (63 letters) Database: /export/scratch/database/MYHITS2/sw.69 184,304 sequences; 66,619,967 total letters [blastpgp] WARNING: posFindAlignmentDimensions: Attempting to recover data from multiple alignment file [blastpgp] WARNING: posProcessAlignment: Alignment recovered successfully Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sw:PO14_NASVI Retrovirus-related Pol polyprotein from type I ret... 50 7e-07 sw:Y2R2_DROME Hypothetical 115 kDa protein in type I retrotransp... 35 0.026 sw:PO11_SCICO Retrovirus-related Pol polyprotein from type I ret... 34 0.039 sw:PO12_NASVI Retrovirus-related Pol polyprotein from type I ret... 32 0.15 sw:PHNA_ECOLI PhnA protein. Escherichia coli, Escherichia coli O... 30 0.44 sw:PO13_NASVI Retrovirus-related Pol polyprotein from type I ret... 30 0.53 >sw:PO14_NASVI Retrovirus-related Pol polyprotein from type I retrotransposable element R1 [Contains: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment). Nasonia vitripennis (Parasitic wasp). Length = 392 Score = 49.5 bits (117), Expect = 7e-07 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 A + C C G + H L ECP FAE R L+ G +PE L + + Sbjct: 302 LAKAAACICC-GEPDNNLHFLLECPAFAEFRDELITPVSGGLEAPEATLMLVSSPEG 357 >sw:Y2R2_DROME Hypothetical 115 kDa protein in type I retrotransposable element R1DM (ORF 2). Drosophila melanogaster (Fruit fly). Length = 1021 Score = 34.5 bits (78), Expect = 0.026 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 + + C C E H+L CP +A++R L + E +L+ E Sbjct: 949 LSDTTAC-ACGDPYEDWMHILCACPLYADLRD--LDGLGVQRLGENWIFEGILDDQE 1002 >sw:PO11_SCICO Retrovirus-related Pol polyprotein from type I retrotransposable element R1 [Contains: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment). Sciara coprophila (Fungus gnat). Length = 1004 Score = 33.7 bits (76), Expect = 0.039 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + +PVC C E +H+L ECP + ++R Sbjct: 924 LSNTPVCM-CGAPNEDVKHLLGECPLYEDLR 953 >sw:PO12_NASVI Retrovirus-related Pol polyprotein from type I retrotransposable element R1 [Contains: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment). Nasonia vitripennis (Parasitic wasp). Length = 410 Score = 31.8 bits (71), Expect = 0.15 Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + S C C E EHVL C + R Sbjct: 325 LSESASCM-CGDVSEDWEHVLCRCSMYESFRN 355 >sw:PHNA_ECOLI PhnA protein. Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri. Length = 111 Score = 30.3 bits (67), Expect = 0.44 Identities = 14/59 (23%), Positives = 25/59 (42%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 P CP+C ++ ++ CP A PA D+ ++ LL +S + I+ Sbjct: 4 PHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTIIK 62 >sw:PO13_NASVI Retrovirus-related Pol polyprotein from type I retrotransposable element R1 [Contains: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment). Nasonia vitripennis (Parasitic wasp). Length = 383 Score = 29.9 bits (66), Expect = 0.53 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + SP C C E HVL EC +A R Sbjct: 301 LSNSPAC-ACGTEREDWIHVLCECDMYAAFR 330 Database: /export/scratch/database/MYHITS2/sw.69 Posted date: Jun 15, 2005 7:24 PM Number of letters in database: 66,619,967 Number of sequences in database: 184,304 Lambda K H 0.315 0.148 0.475 Lambda K H 0.267 0.0444 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,313,117 Number of Sequences: 184304 Number of extensions: 288952 Number of successful extensions: 803 Number of sequences better than 1.0: 7 Number of HSP's better than 1.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 799 Number of HSP's gapped (non-prelim): 7 length of query: 63 length of database: 16,252,624 effective HSP length: 27 effective length of query: 36 effective length of database: 16,252,624 effective search space: 585094464 effective search space used: 585094464 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 64 (29.1 bits) SIB BLAST network server version 1.6 of November 26, 2002 compiled by GNU C version 3.2.3 20030502 (Red Hat Linux 3.2.3-49) compiled on Feb 1 2005. Welcome to the SIB BLAST Network Service (noko01) ============================================================================== Swiss Institute of Bioinformatics (SIB) Ludwig Institute for Cancer Research (LICR) Swiss Institute for Experimental Cancer Research (ISREC) ============================================================================== If results of this search are reported or published, please mention that the computation was performed at the SIB using the BLAST network service. PEPTIDE SEQUENCE DATABASES swiss SwissProt + updates 14-Jul-2004 swisstrembl SwissProt+Trembl+TrUpdates 14-Jul-2004 nr Non-redundant SP+Trembl+TrUpdates+gp 14-Jul-2004 shuffled SwissProt r30 shuffled in windows of 20 aa yeast S.cerevisiae translated genome ORFs NUCLEOTIDE SEQUENCE DATABASES embre * EMBL Data Library, Release 79, June 2004 embu * EmblUpdate 14-Jul-2004 embl * EMBL+EmblUpdate 14-Jul-2004 nr * Synonym to embl (and actually redundant). 14-Jul-2004 EST Database of Expressed Sequence Tags 14-Jul-2004 GSS Genome Survey Sequences 14-Jul-2004 HTG High-thruput Genomic Sequences 14-Jul-2004 STS Database of Sequence Tagged Sites 14-Jul-2004 repbase Repbase, August 04, 2002 simple Simple sequence repeats (J. Mol. Evol. 40:120, 1995) yeast S.cerevisiae genome worm C.elegans genome * The est, gss, htg, and sts divisions of EMBL are excluded from these databases. ============================================================================ The BLAST Network Service uses a server developed at SIB and the NCBI BLAST 2 software. For problems regarding this site, please contact one of the following persons: - problems with the programs: Christian Iseli (Christian.Iseli@licr.org) Giovanna Ambrosini (giovanna.ambrosini@isb-sib.ch) - problems with the databases: Victor Jongeneel (Victor.Jongeneel@isb-sib.ch) Laurent Falquet (Laurent.Falquet@isrec.unil.ch) ============================================================================ BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= consensus (63 letters) Database: /export/scratch/database/MYHITS2/tr.66 1,779,481 sequences; 567,248,508 total letters [blastpgp] WARNING: posFindAlignmentDimensions: Attempting to recover data from multiple alignment file [blastpgp] WARNING: posProcessAlignment: Alignment recovered successfully Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr:Q868S8_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 91 3e-19 tr:Q868R0_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 87 8e-18 tr:Q868Q6_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 85 2e-17 tr:Q5TRE0_ANOGA ENSANGP00000029628. Anopheles gambiae str. PEST. 82 3e-16 tr:Q868Q8_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 79 1e-15 tr:O82276_ARATH Putative non-LTR retroelement reverse transcript... 77 5e-15 tr:Q868R4_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 76 1e-14 tr:Q5TRT9_ANOGA ENSANGP00000026139. Anopheles gambiae str. PEST. 75 2e-14 tr:Q868R2_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 75 3e-14 tr:Q868S6_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 73 8e-14 tr:Q868S2_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 73 1e-13 tr:O81630_ARATH F8M12.22 protein. Arabidopsis thaliana (Mouse-ea... 73 1e-13 tr:Q9ZUY7_ARATH Putative reverse transcriptase. Arabidopsis thal... 73 1e-13 tr:Q9FG26_ARATH Non-LTR retroelement reverse transcriptase-like.... 73 1e-13 tr:Q868S4_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 72 2e-13 tr:Q9SHY0_ARATH F1E22.12. Arabidopsis thaliana (Mouse-ear cress). 72 2e-13 tr:Q868T0_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 72 2e-13 tr:Q9LDL8_ARATH Hypothetical protein AT4g08830. Arabidopsis thal... 72 2e-13 tr:Q9SJZ8_ARATH Putative non-LTR retroelement reverse transcript... 71 4e-13 tr:Q868R8_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 68 4e-12 tr:O80790_ARATH Putative non-LTR retroelement reverse transcript... 66 8e-12 tr:Q868R6_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 64 5e-11 tr:Q8MY27_9NEOP Reverse transcriptase. Papilio xuthus. 63 7e-11 tr:Q9LR94_ARATH T23E23.16. Arabidopsis thaliana (Mouse-ear cress). 63 7e-11 tr:Q868S0_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 63 8e-11 tr:Q8MY35_9NEOP Reverse transcrpitase. Papilio xuthus. 62 2e-10 tr:Q8MY31_9NEOP Reverse transcriptase. Papilio xuthus. 62 2e-10 tr:Q9LP05_ARATH F9C16.13. Arabidopsis thaliana (Mouse-ear cress). 62 2e-10 tr:Q8MY33_9NEOP Reverse transcriptase. Papilio xuthus. 62 2e-10 tr:Q7XJN3_ARATH Putative non-LTR retroelement reverse transcript... 61 3e-10 tr:Q9N9Z1_DROME Endonuclease/reverse transcriptase. Drosophila m... 61 4e-10 tr:O64712_ARATH Putative reverse transcriptase. Arabidopsis thal... 60 6e-10 tr:Q9XE45_ARATH Putative non-LTR retrolelement reverse transcrip... 60 8e-10 tr:Q9ZUF0_ARATH Putative non-LTR retroelement reverse transcript... 60 9e-10 tr:Q868Q4_BOMMO Reverse transcriptase. Bombyx mori (Silk moth). 59 1e-09 tr:Q9SLE9_ARATH Putative non-LTR retroelement reverse transcript... 58 3e-09 tr:O01419_BOMMO Pol protein. Bombyx mori (Silk moth). 57 5e-09 tr:Q9BLI5_BOMMO TRAS3 protein. Bombyx mori (Silk moth). 56 1e-08 tr:Q94H40_ORYSA Putative reverse transcriptase. Oryza sativa (Ri... 56 1e-08 tr:Q9LJP6_ARATH Non-LTR retroelement reverse transcriptase-like ... 56 1e-08 tr:Q851L3_ORYSA Hypothetical protein OSJNBa0042I09.31. Oryza sat... 56 2e-08 tr:Q9SIS9_ARATH Putative non-LTR retroelement reverse transcript... 56 2e-08 tr:Q75LK1_ORYSA Hypothetical protein OSJNBa0096I06.4. Oryza sati... 55 2e-08 tr:Q93139_BOMMO ORF2. Bombyx mori (Silk moth). 55 3e-08 tr:O18558_AEDAE Lian-Aa1 retrotransposon protein. Aedes aegypti ... 55 3e-08 tr:Q5KTM7_BOMMO Reverse transcriptase (Fragment). Bombyx mori (S... 54 4e-08 tr:O64473_ARATH Putative non-LTR retroelement reverse transcript... 54 4e-08 tr:O82216_ARATH Putative non-LTR retroelement reverse transcript... 54 5e-08 tr:Q9M1L6_ARATH Hypothetical protein F18P9_50. Arabidopsis thali... 53 1e-07 tr:Q9SHP2_ARATH Putative non-LTR retroelement reverse transcript... 53 2e-07 tr:Q56W17_ARATH Hypothetical protein. Arabidopsis thaliana (Mous... 52 2e-07 tr:Q7XM87_ORYSA OSJNBb0060E08.12 protein. Oryza sativa (Rice). 52 2e-07 tr:Q9FMM8_ARATH Non-LTR retroelement reverse transcriptase-like ... 52 3e-07 tr:Q9C8I3_ARATH Hypothetical protein F19C24.27. Arabidopsis thal... 51 4e-07 tr:Q9T0D8_ARATH Hypothetical protein AT4g11710. Arabidopsis thal... 51 4e-07 tr:O65246_ARATH F21E10.8 protein. Arabidopsis thaliana (Mouse-ea... 51 5e-07 tr:Q9M1F2_ARATH Hypothetical protein F9K21.130. Arabidopsis thal... 50 6e-07 tr:Q9M3A4_ARATH Hypothetical protein F2K15.140. Arabidopsis thal... 50 6e-07 tr:Q9FNA7_ARATH Non-LTR retroelement reverse transcriptase-like ... 50 9e-07 tr:Q9SA04_ARATH F28K20.4 protein. Arabidopsis thaliana (Mouse-ea... 50 1e-06 tr:Q7XPS4_ORYSA OSJNBa0065O17.7 protein. Oryza sativa (japonica ... 50 1e-06 tr:Q9LMC4_ARATH F14D16.18. Arabidopsis thaliana (Mouse-ear cress). 49 2e-06 tr:O65244_ARATH F21E10.5 protein. Arabidopsis thaliana (Mouse-ea... 49 2e-06 tr:Q9LPA1_ARATH T32E20.19. Arabidopsis thaliana (Mouse-ear cress). 48 2e-06 tr:Q9SF52_ARATH Putative non-LTR reverse transcriptase. Arabidop... 48 4e-06 tr:Q9SKJ4_ARATH Putative non-LTR retroelement reverse transcript... 48 4e-06 tr:Q7XJS2_ARATH Putative non-LTR retroelement reverse transcript... 47 8e-06 tr:Q9FZF6_ARATH T2E6.13. Arabidopsis thaliana (Mouse-ear cress). 46 9e-06 tr:Q9ZQF8_ARATH Putative non-LTR retroelement reverse transcript... 46 9e-06 tr:Q9LJX3_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, ... 46 1e-05 tr:Q9LQL9_ARATH F5D14.16 protein. Arabidopsis thaliana (Mouse-ea... 46 1e-05 tr:Q9SIQ5_ARATH Putative non-LTR retroelement reverse transcript... 46 2e-05 tr:Q6DYD9_ARATH Hypothetical protein. Arabidopsis thaliana (Mous... 46 2e-05 tr:Q9XEU4_ORYSA Putative reverse transcriptase. Oryza sativa (Ri... 46 2e-05 tr:Q9C7L9_ARATH Hypothetical protein F14C21.48. Arabidopsis thal... 45 2e-05 tr:O22220_ARATH Putative non-LTR retroelement reverse transcript... 45 2e-05 tr:Q6ID20_ARATH At3g42803. Arabidopsis thaliana (Mouse-ear cress). 45 2e-05 tr:Q5Q0G1_ARATH Hypothetical protein. Arabidopsis thaliana (Mous... 45 2e-05 tr:Q9ZQG1_ARATH Putative non-LTR retroelement reverse transcript... 45 3e-05 tr:Q9C697_ARATH Reverse transcriptase, putative; 16838-20266. Ar... 45 3e-05 tr:Q9LQF1_ARATH F15O4.34. Arabidopsis thaliana (Mouse-ear cress). 45 4e-05 tr:Q9LSE9_ARATH Reverse transcriptase-like protein. Arabidopsis ... 44 5e-05 tr:Q9LVT7_ARATH Similarity to non-LTR retroelement reverse trans... 44 6e-05 tr:Q9SJ38_ARATH Putative non-LTR retroelement reverse transcript... 44 7e-05 tr:Q9FL83_ARATH Non-LTR retroelement reverse transcriptase-like ... 44 7e-05 tr:Q8LK27_BRANA Putative AP endonuclease/reverse transcriptase. ... 43 9e-05 tr:Q75LZ3_ORYSA Hypothetical protein P0676G05.18. Oryza sativa (... 43 9e-05 tr:Q7XNY0_ORYSA OSJNBb0015N08.11 protein (OSJNBa0035M09.1 protei... 42 2e-04 tr:Q8RUE6_ARATH Putative reverse transcriptase. Arabidopsis thal... 42 2e-04 tr:Q64M76_ORYSA Phosphoribosyl pyrophosphate synthase-like. Oryz... 42 3e-04 tr:O22148_ARATH Putative non-LTR retroelement reverse transcript... 42 3e-04 tr:Q9LXW5_ARATH Hypothetical protein T15B3_80. Arabidopsis thali... 42 3e-04 tr:Q7M4J4_BOMMO RNA-directed DNA polymerase (EC 2.7.7.49) homolo... 41 3e-04 tr:Q9MAK3_ARATH F27F5.14. Arabidopsis thaliana (Mouse-ear cress). 41 3e-04 tr:Q5NTZ0_BOMMO Non-LTR retrotransposon R1Bmks ORF2 protein. Bom... 41 3e-04 tr:O81068_ARATH Putative non-LTR retroelement reverse transcript... 41 3e-04 tr:Q9C6L3_ARATH Hypothetical protein F2J7.11. Arabidopsis thalia... 41 4e-04 tr:Q6K4X1_ORYSA Hypothetical protein OSJNBa0035A24.33. Oryza sat... 41 4e-04 tr:Q7XMF6_ORYSA OSJNBa0061G20.3 protein. Oryza sativa (japonica ... 41 4e-04 tr:Q9SY58_ARATH F14N23.4. Arabidopsis thaliana (Mouse-ear cress). 41 4e-04 tr:Q9LNZ2_ARATH F9C16.26. Arabidopsis thaliana (Mouse-ear cress). 41 4e-04 tr:Q9MFF1_BETVU Orf315 protein. Beta vulgaris subsp. vulgaris. 41 4e-04 tr:Q6YBU8_LYMDI Reverse transcriptase/integrase. Lymantria dispa... 41 4e-04 tr:Q9NBJ4_DROAN Reverse transcriptase (Fragment). Drosophila ana... 41 4e-04 tr:Q9XIG3_ARATH T10P12.5 protein. Arabidopsis thaliana (Mouse-ea... 41 4e-04 tr:Q8LK00_SORBI Putative reverse transcriptase. Sorghum bicolor ... 41 4e-04 tr:Q53K65_ORYSA Hypothetical protein. Oryza sativa (japonica cul... 41 5e-04 tr:O80781_ARATH Putative non-LTR retroelement reverse transcript... 41 5e-04 tr:Q6I5S8_ORYSA Putative polyprotein. Oryza sativa (japonica cul... 41 5e-04 tr:Q7XET4_ORYSA Contains similarity to non-LTR reverse transcrip... 40 7e-04 tr:Q76IK6_CIOIN Pol-like protein. Ciona intestinalis. 40 8e-04 tr:O80591_ARATH T27I1.2 protein. Arabidopsis thaliana (Mouse-ear... 40 8e-04 tr:Q851P0_ORYSA Hypothetical protein OSJNBa0042I09.4. Oryza sati... 40 8e-04 tr:Q9LH44_ARATH Copia-like retrotransposable element. Arabidopsi... 40 9e-04 tr:Q5H9Y7_ORYSA P0650D04.15 protein. Oryza sativa (Rice). 40 0.001 tr:Q5U6D4_BETVU Orf147a protein. Beta vulgaris subsp. vulgaris. 40 0.001 tr:Q8SA93_MAIZE Putative polyprotein. Zea mays (Maize). 40 0.001 tr:Q8S7Y0_ORYSA Putative retroelement. Oryza sativa (Rice). 39 0.002 tr:Q7XHA9_ORYSA Putative retroelement. Oryza sativa (japonica cu... 39 0.002 tr:Q9FW98_ORYSA Putative non-LTR retroelement reverse transcript... 39 0.002 tr:Q9LVQ1_ARATH Non-LTR retroelement reverse transcriptase-like.... 39 0.002 tr:Q60DM2_ORYSA F-box domain containing protein. Oryza sativa (j... 39 0.002 tr:Q7XT18_ORYSA OSJNBb0050O03.4 protein. Oryza sativa (japonica ... 39 0.002 tr:O64724_ARATH Putative non-LTR retroelement reverse transcript... 38 0.002 tr:Q8H992_ORYSA Oryza sativa (japonica cultivar-group) retrotran... 38 0.002 tr:Q7Y193_ORYSA Putative reverse transcriptase. Oryza sativa (ja... 38 0.003 tr:Q8H0A5_ORYSA Retrotransposon protein, putative, unclassified ... 38 0.003 tr:Q9ZVF0_ARATH Putative non-LTR retroelement reverse transcript... 38 0.004 tr:Q9FYJ4_ARATH F17F8.5. Arabidopsis thaliana (Mouse-ear cress). 38 0.004 tr:Q9LHK6_ARATH Similarity to non-LTR retroelement reverse trans... 38 0.005 tr:Q9NBI8_9DIPT Reverse transcriptase (Fragment). Drosophila ori... 38 0.005 tr:Q9NBJ0_9DIPT Reverse transcriptase (Fragment). Drosophila neo... 38 0.005 tr:Q8RV54_ORYSA Reverse transcriptase-like protein. Oryza sativa... 38 0.005 tr:Q9FJA4_ARATH Non-LTR retroelement reverse transcriptase-like ... 38 0.005 tr:Q9C7N6_ARATH Reverse transcriptase, putative; 100033-105622. ... 38 0.005 tr:Q9NBI0_9DIPT Reverse transcriptase (Fragment). Drosophila tes... 37 0.005 tr:O64612_ARATH Putative reverse transcriptase. Arabidopsis thal... 37 0.005 tr:Q53JP3_ORYSA Hypothetical protein. Oryza sativa (japonica cul... 37 0.006 tr:Q9SK98_ARATH Very similar to retrotransposon reverse transcri... 37 0.007 tr:Q5B300_EMENI Hypothetical protein. Aspergillus nidulans FGSC A4. 37 0.007 tr:Q84Q64_ORYSA Hypothetical protein OSJNBa0071M09.16. Oryza sat... 37 0.007 tr:Q7F805_ORYSA Oryza sativa (japonica cultivar-group) genomic D... 37 0.007 tr:Q5ZDG9_ORYSA Hypothetical protein P0480E02.9. Oryza sativa (j... 37 0.008 tr:Q53KA7_ORYSA Hypothetical protein. Oryza sativa (japonica cul... 37 0.008 tr:Q7Y1F8_ORYSA Putative reverse transcriptase. Oryza sativa (ja... 37 0.008 tr:Q7PVA9_ANOGA ENSANGP00000013352 (Fragment). Anopheles gambiae... 37 0.008 tr:Q9SZD8_ARATH Hypothetical protein F19B15.120 (Hypothetical pr... 37 0.009 tr:Q8H031_ORYSA Putative retroelement. Oryza sativa (japonica cu... 36 0.010 tr:Q947X7_ORYSA Hypothetical protein OSJNBa0067N01.20. Oryza sat... 36 0.010 tr:Q76IK9_BRARE Pol-like protein. Brachydanio rerio (Zebrafish) ... 36 0.010 tr:O81284_ARATH T14P8.10 (AT4g02490 protein). Arabidopsis thalia... 36 0.011 tr:Q53PW4_ORYSA Hypothetical protein. Oryza sativa (japonica cul... 36 0.013 tr:Q9NBJ3_9DIPT Reverse transcriptase (Fragment). Drosophila bra... 36 0.013 tr:Q84JX8_ORYSA Putative reverse transcriptase. Oryza sativa (ja... 36 0.014 tr:Q8H0A6_ORYSA Hypothetical protein. Oryza sativa (japonica cul... 36 0.014 tr:Q9SXN3_BRACM SAE1-S9-protein. Brassica campestris (Field must... 36 0.017 tr:Q76IK7_CIOIN Pol-like protein. Ciona intestinalis. 36 0.018 tr:Q9ZVH1_ARATH T2P11.5 protein. Arabidopsis thaliana (Mouse-ear... 36 0.019 tr:Q6H671_ORYSA Hypothetical protein OJ1112_F09.38 (Hypothetical... 36 0.019 tr:Q5SMW3_ORYSA Cyst nematode resistance protein-like. Oryza sat... 36 0.020 tr:Q5ZCK2_ORYSA Rust resistance protein Rp1-dp8-like. Oryza sati... 36 0.020 tr:Q7XNI4_ORYSA OSJNBb0032D24.9 protein. Oryza sativa (japonica ... 36 0.020 tr:Q53NR1_ORYSA Retrotransposon protein, putative, unclassified.... 35 0.022 tr:Q65WR1_ORYSA Putative polyprotein. Oryza sativa (japonica cul... 35 0.022 tr:Q54GK0_DICDI Hypothetical protein. Dictyostelium discoideum (... 35 0.024 tr:Q5TRT5_ANOGA ENSANGP00000028602. Anopheles gambiae str. PEST. 35 0.025 tr:Q8H044_ORYSA Putative reverse transcriptase. Oryza sativa (ja... 35 0.028 tr:Q8S6P1_ORYSA Putative reverse transcriptase. Oryza sativa (ja... 35 0.029 tr:Q50SW4_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 35 0.031 tr:Q9SZ87_ARATH RNA-directed DNA polymerase-like protein. Arabid... 35 0.031 tr:Q7YXU7_DUGTI ORF2 (Fragment). Dugesia tigrina (Planarian). 35 0.031 tr:Q8LMT3_ORYSA Putative retroelement. Oryza sativa (japonica cu... 35 0.032 tr:Q7XUX8_ORYSA OSJNBa0027G07.11 protein. Oryza sativa (japonica... 35 0.034 tr:Q9NBI4_9DIPT Reverse transcriptase (Fragment). Drosophila qui... 35 0.036 tr:Q515B3_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 35 0.039 tr:Q9XIH8_ARATH Putative non-LTR retrolelement reverse transcrip... 35 0.039 tr:Q9NBI1_9DIPT Reverse transcriptase (Fragment). Drosophila rec... 35 0.043 tr:Q9NBI6_9DIPT Reverse transcriptase (Fragment). Drosophila pal... 35 0.044 tr:Q7XTR4_ORYSA OSJNBb0085C12.5 protein. Oryza sativa (japonica ... 35 0.044 tr:Q9FYK1_ARATH F21J9.30. Arabidopsis thaliana (Mouse-ear cress). 34 0.053 tr:Q76IN9_CIOIN Reverse transcriptase (Fragment). Ciona intestin... 34 0.057 tr:Q7XU53_ORYSA OSJNBa0006A01.18 protein. Oryza sativa (Rice). 34 0.059 tr:Q5N7N0_ORYSA Cyst nematode resistance protein-like protein. O... 34 0.061 tr:Q54S56_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q54X36_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q54ZT3_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q556X2_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q55CH5_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q55E47_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q55EZ2_DICDI Hypothetical protein. Dictyostelium discoideum (... 34 0.062 tr:Q6YTX0_ORYSA Hypothetical protein OSJNBb0018L13.19. Oryza sat... 34 0.062 tr:Q9NBI7_9DIPT Reverse transcriptase (Fragment). Drosophila ori... 34 0.062 tr:Q9NBJ2_9DIPT Reverse transcriptase (Fragment). Drosophila cur... 34 0.062 tr:Q7G6D1_ORYSA Putative non-LTR retroelement reverse transcript... 34 0.067 tr:Q8SAZ6_ORYSA Putative non-LTR retroelement reverse transcript... 34 0.067 tr:Q9NBH9_9DIPT Reverse transcriptase (Fragment). Drosophila tes... 34 0.068 tr:Q76IK4_CIOIN Pol-like protein. Ciona intestinalis. 34 0.069 tr:Q76B34_FUGRU Reverse transcriptase. Fugu rubripes (Japanese p... 34 0.070 tr:Q7XKF7_ORYSA OSJNBb0065J09.12 protein. Oryza sativa (Rice). 34 0.071 tr:Q9NBI5_9DIPT Reverse transcriptase (Fragment). Drosophila pal... 34 0.072 tr:Q9NBI9_9DIPT Reverse transcriptase (Fragment). Drosophila neo... 34 0.073 tr:Q57GT8_SALCH Putative alkylphosphonate uptake protein in phos... 33 0.081 tr:Q5PJ10_SALPA Hypothetical protein phnA. Salmonella paratyphi-a. 33 0.081 tr:Q7CPA4_SALTY Putative alkylphosphonate uptake protein in phos... 33 0.081 tr:Q8XGQ5_SALTI Hypothetical protein phnA (Hypothetical protein ... 33 0.081 tr:Q6AVS1_ORYSA Hypothetical protein OSJNBa0075M12.1. Oryza sati... 33 0.081 tr:Q67TV5_ORYSA Nuclear transport factor 2 (NTF2)-like protein. ... 33 0.083 tr:Q8SA91_MAIZE Putative gag-pol polyprotein. Zea mays (Maize). 33 0.089 tr:Q54NQ3_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.095 tr:Q55EE5_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.095 tr:Q53PH7_ORYSA Retrotransposon protein, putative, unclassified.... 33 0.097 tr:Q8S126_ORYSA Hypothetical protein P0415A04.25. Oryza sativa (... 33 0.10 tr:Q54TS9_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.10 tr:Q54SL0_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.11 tr:Q9SYH7_ARATH Putative transposon protein. Arabidopsis thalian... 33 0.11 tr:Q5ZE20_ORYSA Hypothetical protein P0410E03.6. Oryza sativa (j... 33 0.12 tr:Q54SC7_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.12 tr:O46185_DROSU Putative reverse transcriptase (Fragment). Droso... 33 0.12 tr:Q8LJX1_SORBI Putative reverse transcriptase. Sorghum bicolor ... 33 0.12 tr:Q9NBI3_9DIPT Reverse transcriptase (Fragment). Drosophila qui... 33 0.12 tr:Q6XMP6_AEDAL Reverse transcriptase (Fragment). Aedes albopict... 33 0.12 tr:Q54PS6_DICDI Hypothetical protein. Dictyostelium discoideum (... 33 0.13 tr:Q9P8H7_CANAL Reverse transcriptase. Candida albicans (Yeast). 33 0.14 tr:Q76B32_TETNG Reverse transcriptase. Tetraodon nigroviridis (G... 33 0.14 tr:Q50S16_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 33 0.15 tr:Q50WA1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 33 0.15 tr:Q512P9_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 33 0.15 tr:Q51F82_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 33 0.15 tr:Q6ZIA0_ORYSA Cyst nematode resistance protein-like. Oryza sat... 33 0.16 tr:Q6Z698_ORYSA Cyst nematode resistance protein-like. Oryza sat... 33 0.17 tr:Q50MS1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 32 0.17 tr:Q9LQJ0_ARATH F28G4.15 protein (Hypothetical protein). Arabido... 32 0.17 tr:Q54BV4_DICDI Hypothetical protein. Dictyostelium discoideum (... 32 0.17 tr:Q76IK2_ANOGA Pol-like protein. Anopheles gambiae (African mal... 32 0.17 tr:Q76IM9_CIOIN Reverse transcriptase. Ciona intestinalis. 32 0.17 tr:Q54VY5_DICDI Hypothetical protein. Dictyostelium discoideum (... 32 0.19 tr:O96303_TRIVA Translation initiation factor 2 gamma subunit (F... 32 0.20 tr:Q54KC5_DICDI Hypothetical protein. Dictyostelium discoideum (... 32 0.20 tr:Q54CF1_DICDI Hypothetical protein (Fragment). Dictyostelium d... 32 0.22 tr:Q51HC1_MAGGR Hypothetical protein. Magnaporthe grisea 70-15. 32 0.22 tr:Q7XMG7_ORYSA OSJNBa0028I23.15 protein. Oryza sativa (japonica... 32 0.22 tr:Q7XR08_ORYSA OSJNBa0015K02.4 protein (OSJNBa0011F23.17 protei... 32 0.22 tr:Q551M1_DICDI Hypothetical protein. Dictyostelium discoideum (... 32 0.23 tr:Q94DG5_ORYSA Hypothetical protein P0518C01.27 (Hypothetical p... 32 0.23 tr:Q7X7T7_ORYSA OSJNBa0084K20.4 protein (OSJNBa0076N16.2 protein... 32 0.23 tr:Q9S9V5_ARATH T19J18.5 protein (AT4g04650 protein). Arabidopsi... 32 0.25 tr:Q7XX00_ORYSA OSJNBa0079F16.5 protein. Oryza sativa (Rice). 32 0.26 tr:Q59KQ0_CANAL Polyprotein of L1-like non-LTR retrotransposon Z... 32 0.27 tr:Q84M62_ORYSA Hypothetical protein OSJNBa0059G06.21. Oryza sat... 32 0.27 tr:Q50PB9_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 31 0.29 tr:Q5TT89_ANOGA ENSANGP00000020605 (Fragment). Anopheles gambiae... 31 0.34 tr:Q9NBI2_9DIPT Reverse transcriptase (Fragment). Drosophila rec... 31 0.35 tr:Q9NBJ1_9DIPT Reverse transcriptase (Fragment). Drosophila fal... 31 0.35 tr:Q9GP60_DROME Pol protein. Drosophila melanogaster (Fruit fly). 31 0.39 tr:Q9ZQX2_ARATH Putative reverse transcriptase. Arabidopsis thal... 31 0.41 tr:Q5TT90_ANOGA ENSANGP00000006819 (Fragment). Anopheles gambiae... 31 0.41 tr:Q50MD5_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 31 0.46 tr:Q7F2K5_ORYSA OSJNBb0008G24.5 protein. Oryza sativa (japonica ... 31 0.52 tr:Q7XXJ4_ORYSA OSJNBa0094O15.6 protein. Oryza sativa (japonica ... 31 0.55 tr:Q24363_DROME Putative ORF2. Drosophila melanogaster (Fruit fly). 31 0.55 tr:Q76IL9_BRARE Pol-like protein. Brachydanio rerio (Zebrafish) ... 31 0.55 tr:Q8LM65_ORYSA Putative non-LTR retroelement reverse transcript... 31 0.56 tr:Q76IN3_ENTHI Reverse transcriptase. Entamoeba histolytica. 31 0.59 tr:Q51AK7_ENTHI Reverse transcriptase, putative. Entamoeba histo... 31 0.59 tr:Q513T4_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 31 0.61 tr:Q50LJ1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 31 0.63 tr:Q7X970_ORYSA BZIP-like protein. Oryza sativa (japonica cultiv... 30 0.66 tr:Q51GQ8_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 30 0.67 tr:Q75M12_ORYSA Hypothetical protein P0676G05.2 (Hypothetical pr... 30 0.67 tr:Q8H313_ORYSA Hypothetical protein P0710F09.110. Oryza sativa ... 30 0.68 tr:Q76IN1_TETNG Reverse transcriptase. Tetraodon nigroviridis (G... 30 0.68 tr:Q7T1J8_TETNG Polyprotein. Tetraodon nigroviridis (Green puffer). 30 0.69 tr:Q7Q8Q2_ANOGA ENSANGP00000017936. Anopheles gambiae str. PEST. 30 0.78 tr:Q8HCR0_ORYSA Orf258 protein. Oryza sativa (japonica cultivar-... 30 0.80 tr:Q50PR0_ENTHI Hypothetical protein. Entamoeba histolytica HM-1... 30 0.91 tr:Q8W5F7_ORYSA Hypothetical protein OSJNBb0008A05.6. Oryza sati... 30 0.92 tr:Q76IN5_ANOGA Reverse transcriptase. Anopheles gambiae (Africa... 30 0.99 tr:Q7Q8Q3_ANOGA ENSANGP00000017908. Anopheles gambiae str. PEST. 30 1.00 >tr:Q868S8_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1099 Score = 91.1 bits (225), Expect = 3e-19 Identities = 37/63 (58%), Positives = 43/63 (68%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 F SP C RC G ETAEH +FECPRFAE+R++LL G+ D PENL + LL ESWS Sbjct: 935 FTSSPDCQRCSGVPETAEHAMFECPRFAEVRQQLLGEGITDPVRPENLQQHLLRDAESWS 994 Query: 61 RIQ 63 RI Sbjct: 995 RIC 997 >tr:Q868R0_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1173 Score = 86.5 bits (213), Expect = 8e-18 Identities = 37/63 (58%), Positives = 42/63 (66%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 F PSP C RC G ETAEH +FECPRFAEIR++LL D +PE L LL+S E WS Sbjct: 959 FTPSPDCIRCTGVPETAEHAMFECPRFAEIRQKLLGEANTDAITPETLQFHLLQSQEKWS 1018 Query: 61 RIQ 63 RI Sbjct: 1019 RIA 1021 >tr:Q868Q6_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1248 Score = 85.0 bits (209), Expect = 2e-17 Identities = 38/63 (60%), Positives = 46/63 (73%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 FAPSP CP C G+VE+ HVLF CPRFAE+RR LL GV + ENL + LL+S +SW+ Sbjct: 941 FAPSPECPACTGSVESVAHVLFYCPRFAEVRRDLLEMGVDGSITGENLGQMLLKSSDSWT 1000 Query: 61 RIQ 63 RIQ Sbjct: 1001 RIQ 1003 >tr:Q5TRE0_ANOGA ENSANGP00000029628. Anopheles gambiae str. PEST. Length = 559 Score = 81.5 bits (200), Expect = 3e-16 Identities = 34/63 (53%), Positives = 43/63 (68%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 FAPSP CP C G+VE+ HVLF CPRF E+RR LL G + EN+ LL+S +SW+ Sbjct: 319 FAPSPECPECTGSVESVAHVLFHCPRFVEVRRDLLDLGTDGPITEENIGRRLLQSSDSWT 378 Query: 61 RIQ 63 RI+ Sbjct: 379 RIK 381 >tr:Q868Q8_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1154 Score = 79.2 bits (194), Expect = 1e-15 Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 5/63 (7%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 F SP CPRCPG VE EHV+FECPRFAE+R LL D PE L +L+S +WS Sbjct: 950 FTSSPACPRCPGVVEGVEHVMFECPRFAEVRSELL-----DGVLPETLEAHMLQSPTNWS 1004 Query: 61 RIQ 63 + Sbjct: 1005 NVC 1007 >tr:O82276_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1231 Score = 77.3 bits (189), Expect = 5e-15 Identities = 24/63 (38%), Positives = 33/63 (52%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + + +C C GA ET HVL +CP I RRLLP +F ++LLEWL + + Sbjct: 938 LSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMDPVK 997 Query: 61 RIQ 63 I Sbjct: 998 GIW 1000 >tr:Q868R4_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1222 Score = 76.1 bits (186), Expect = 1e-14 Identities = 35/63 (55%), Positives = 40/63 (63%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 FAPS CPRCPG+VE+ HVLF+C F EIR LL G D + NL LLES E W+ Sbjct: 944 FAPSAECPRCPGSVESVAHVLFQCEVFHEIRVELLGYGTSDPVNENNLGMKLLESPERWN 1003 Query: 61 RIQ 63 IQ Sbjct: 1004 SIQ 1006 >tr:Q5TRT9_ANOGA ENSANGP00000026139. Anopheles gambiae str. PEST. Length = 1221 Score = 75.3 bits (184), Expect = 2e-14 Identities = 35/63 (55%), Positives = 40/63 (63%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 FAPS CPRCPG+VE+ HVLF C F EIR L+ G D S +NL LLES E W+ Sbjct: 943 FAPSAECPRCPGSVESVAHVLFRCEVFHEIRVELMGYGTSDPVSEDNLGMKLLESPERWN 1002 Query: 61 RIQ 63 IQ Sbjct: 1003 NIQ 1005 >tr:Q868R2_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1168 Score = 75.0 bits (183), Expect = 3e-14 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 5/63 (7%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 FAPSP CPRC G+VE+ HV+FECPRFA++R L NL LLES E W Sbjct: 946 FAPSPDCPRCAGSVESVAHVMFECPRFADVRAEFL-----QGVGEHNLGSRLLESAEWWD 1000 Query: 61 RIQ 63 RIQ Sbjct: 1001 RIQ 1003 >tr:Q868S6_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1049 Score = 73.4 bits (179), Expect = 8e-14 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 A S CP C ET +HV+F CPRFAE R +L + + NL++ +L+ +SW Sbjct: 965 RASSSRCPACKDEDETVDHVMFHCPRFAEERLQLNESCRV-EVGCSNLVQVMLQHTDSWE 1023 Query: 61 R 61 Sbjct: 1024 A 1024 >tr:Q868S2_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1201 Score = 73.0 bits (178), Expect = 1e-13 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 5/63 (7%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 SP C RCPG E+AEH +FECPRF R LL PE LLE +L+S E+WS Sbjct: 1010 LTSSPDCTRCPGVAESAEHAMFECPRFDSTRTELL-----HGVVPETLLEHMLQSPENWS 1064 Query: 61 RIQ 63 + Sbjct: 1065 NVC 1067 >tr:O81630_ARATH F8M12.22 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 1662 Score = 72.6 bits (177), Expect = 1e-13 Identities = 19/63 (30%), Positives = 24/63 (38%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 P CPRCP ET HVLF CP A I + ++ E + S+S Sbjct: 1394 MDIDPHCPRCPTEEETINHVLFTCPYAASIWGLSNFPWLPGHTFSQDTEENISFLINSFS 1453 Query: 61 RIQ 63 Sbjct: 1454 NNT 1456 >tr:Q9ZUY7_ARATH Putative reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 314 Score = 72.6 bits (177), Expect = 1e-13 Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + S +C C GA +T H+L +CP I RL+PAG +F ++LLEWL + Sbjct: 16 LSDSDICQICKGAEKTIIHILRDCPAMEGIWIRLVPAGKRREFFTQSLLEWLFANLGDRR 75 Query: 61 RIQ 63 + Sbjct: 76 KTC 78 >tr:Q9FG26_ARATH Non-LTR retroelement reverse transcriptase-like. Arabidopsis thaliana (Mouse-ear cress). Length = 676 Score = 72.6 bits (177), Expect = 1e-13 Identities = 23/60 (38%), Positives = 31/60 (51%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 A S VCP C GA E+ HVL +CP I R++P F +LLEW+ + + S Sbjct: 379 MADSDVCPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLKERS 438 >tr:Q868S4_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 973 Score = 72.3 bits (176), Expect = 2e-13 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 A SP CP C VE+ EHVLF CPRFAE R + G + NL E +L++ +W Sbjct: 902 HASSPDCPACVSIVESTEHVLFHCPRFAEERHEI-TVKCGTTINGTNLTELMLKNAGTWE 960 Query: 61 RIQ 63 I Sbjct: 961 VIA 963 >tr:Q9SHY0_ARATH F1E22.12. Arabidopsis thaliana (Mouse-ear cress). Length = 1055 Score = 72.3 bits (176), Expect = 2e-13 Identities = 21/63 (33%), Positives = 31/63 (49%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + S VC C G VE+ HVL +CP I R++P F ++L EWL ++ S Sbjct: 432 LSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDRS 491 Query: 61 RIQ 63 + Sbjct: 492 GCE 494 >tr:Q868T0_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1173 Score = 71.9 bits (175), Expect = 2e-13 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 5/63 (7%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 F SP CP CPG E+AEH +F C RFAE+R RL+ D +P+ LL +L+S ++WS Sbjct: 954 FTSSPDCPNCPGVRESAEHAMFACLRFAEVRERLM-----DGVNPDTLLTHMLQSQQNWS 1008 Query: 61 RIQ 63 + Sbjct: 1009 NVC 1011 >tr:Q9LDL8_ARATH Hypothetical protein AT4g08830. Arabidopsis thaliana (Mouse-ear cress). Length = 947 Score = 71.9 bits (175), Expect = 2e-13 Identities = 21/61 (34%), Positives = 27/61 (44%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + VC C G ET HVL +CP A I RRL+ DF +L WL + + Sbjct: 712 IGDTSVCQVCKGGDETILHVLKDCPSIAGIWRRLVQVQRSYDFFNGSLFGWLYVNLGMKN 771 Query: 61 R 61 Sbjct: 772 A 772 >tr:Q9SJZ8_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 321 Score = 71.1 bits (173), Expect = 4e-13 Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 + + VC C G ET HVL +CP A I RL+P F +LLEW+ ++ Sbjct: 29 LSDTRVCQICQGGEETILHVLRDCPAMAGIWSRLVPRDQIRQFFTASLLEWIYKNLRER 87 >tr:Q868R8_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 988 Score = 68.0 bits (165), Expect = 4e-12 Identities = 21/57 (36%), Positives = 23/57 (40%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 SP CP C AVE EHVLF CPR IR + + E SD Sbjct: 932 LEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCHSRVTMDNIVSEMCARSDT 988 >tr:O80790_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 970 Score = 66.5 bits (161), Expect = 8e-12 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + C C GA E+ HVL +CP I +RLLP ++F + EWL + + Sbjct: 679 LSDIATCSVCNGADESILHVLRDCPAMTPIWQRLLPQRRQNEFFSQ--FEWLFTNLDPAK 736 Query: 61 RIQ 63 Sbjct: 737 GDW 739 >tr:Q868R6_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1022 Score = 64.2 bits (155), Expect = 5e-11 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 PSPVCP C +TAEH +F C + R RL + DF EN + + + +W+R+ Sbjct: 915 PSPVCPACGDENQTAEHTIFICGMYLLTRLRLE-QDLQADFDVENAINIMCSDEVTWNRV 973 Query: 63 Q 63 Sbjct: 974 A 974 >tr:Q8MY27_9NEOP Reverse transcriptase. Papilio xuthus. Length = 1053 Score = 63.4 bits (153), Expect = 7e-11 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 1 FAPSPVCPRCPGAVE-TAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 PS VC C E TA+H L ECP +AE RR L+ A VG+D S ++ ++ SDE+W Sbjct: 948 REPSAVCHHCDDCPEDTAQHTLAECPAWAEHRRDLV-AAVGEDLSLPATIKSMVGSDEAW 1006 Query: 60 SRIQ 63 +Q Sbjct: 1007 KAVQ 1010 >tr:Q9LR94_ARATH T23E23.16. Arabidopsis thaliana (Mouse-ear cress). Length = 653 Score = 63.4 bits (153), Expect = 7e-11 Identities = 17/63 (26%), Positives = 21/63 (33%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 SP C C +ET H+ F C AEI L FS S + Sbjct: 522 RRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWSTILTSVSTTWRN 581 Query: 61 RIQ 63 R + Sbjct: 582 RTE 584 >tr:Q868S0_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1009 Score = 63.4 bits (153), Expect = 8e-11 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 SP+C C E AEH +F C R E+ RL V ++ +PEN++E + + +WS Sbjct: 908 LTGSPLCDAC-EEPEDAEHTIFHCVRHRELIIRL-QHQVDEELTPENIIEVMSANRYNWS 965 Query: 61 RIQ 63 + Sbjct: 966 MVH 968 >tr:Q8MY35_9NEOP Reverse transcrpitase. Papilio xuthus. Length = 1053 Score = 62.2 bits (150), Expect = 2e-10 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 1 FAPSPVCPRCPGAVE-TAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 PS VC C E TA+H L ECP + E RR L+ A VGDD S + ++ESD +W Sbjct: 948 REPSAVCHHCDDCPEDTAQHTLAECPAWTEQRRDLV-AAVGDDLSLPATVRSMVESDGAW 1006 Query: 60 SRIQ 63 +Q Sbjct: 1007 RAVQ 1010 >tr:Q8MY31_9NEOP Reverse transcriptase. Papilio xuthus. Length = 1053 Score = 62.2 bits (150), Expect = 2e-10 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 1 FAPSPVCPRCPGAVE-TAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 PS VC C E TA+H L ECP + E RR L+ A VGDD S + ++ESD +W Sbjct: 948 REPSAVCHHCDDCPEDTAQHTLAECPAWTEQRRDLV-AAVGDDLSLPATVRSMVESDGAW 1006 Query: 60 SRIQ 63 +Q Sbjct: 1007 RAVQ 1010 >tr:Q9LP05_ARATH F9C16.13. Arabidopsis thaliana (Mouse-ear cress). Length = 1172 Score = 61.9 bits (149), Expect = 2e-10 Identities = 17/52 (32%), Positives = 27/52 (51%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 VC C G ET H+L +CP A + +++P F ++L+EWL + Sbjct: 113 VCQMCKGGSETILHMLQDCPAMAGLWNQIIPRRRRRLFFEQSLIEWLYSNLG 164 >tr:Q8MY33_9NEOP Reverse transcriptase. Papilio xuthus. Length = 1053 Score = 61.9 bits (149), Expect = 2e-10 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 1 FAPSPVCPRCPGAVE-TAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 PS VC C E TA+H L ECP + E RR L+ A VGDD S + ++ESD +W Sbjct: 948 REPSAVCHHCDDCPEDTAQHTLAECPAWTEQRRDLV-AAVGDDLSLPATVRSMVESDGAW 1006 Query: 60 SRIQ 63 +Q Sbjct: 1007 RAVQ 1010 >tr:Q7XJN3_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 296 Score = 61.5 bits (148), Expect = 3e-10 Identities = 13/60 (21%), Positives = 23/60 (38%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 C C VET H+ F+CP ++ +L+ + ++ L + S R Sbjct: 167 DTTCKFCAEPVETRNHLFFQCPYSTQVWEKLMKGLLQGHYTSSWDRIVTLLTSSSLGRKH 226 >tr:Q9N9Z1_DROME Endonuclease/reverse transcriptase. Drosophila melanogaster (Fruit fly). Length = 989 Score = 60.7 bits (146), Expect = 4e-10 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + C C AVETAEH+L C RFAE R +L+ A G SP L+ ++ W Sbjct: 907 HVDTAQCLYCTDAVETAEHILLHCSRFAEERAQLV-ALAGSPLSPRGLVAAMMADKIVWD 965 Query: 61 RIQ 63 Sbjct: 966 GAH 968 >tr:O64712_ARATH Putative reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 365 Score = 60.3 bits (145), Expect = 6e-10 Identities = 13/63 (20%), Positives = 20/63 (31%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 P+C RC ET H++F CP + R P + + L + Sbjct: 69 IDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSK 128 Query: 61 RIQ 63 Sbjct: 129 TQT 131 >tr:Q9XE45_ARATH Putative non-LTR retrolelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 732 Score = 59.9 bits (144), Expect = 8e-10 Identities = 15/62 (24%), Positives = 24/62 (38%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + + +C C GA E+ HVL +CP I RL+ + + L + Sbjct: 600 LSTTTICQVCKGAKESIIHVLRDCPAMEGIWLRLISDLANEVSAAHLKLSGNTKEIVQVE 659 Query: 61 RI 62 R Sbjct: 660 RQ 661 >tr:Q9ZUF0_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1352 Score = 59.9 bits (144), Expect = 9e-10 Identities = 12/58 (20%), Positives = 19/58 (32%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 C C +ET +H+ F CP + + L + L D S + Sbjct: 1244 DCVFCGEELETRDHLFFSCPYSSHVWFSLTKGLLNGRNILNWNLITPHLLDSSRPYLH 1301 >tr:Q868Q4_BOMMO Reverse transcriptase. Bombyx mori (Silk moth). Length = 1076 Score = 59.2 bits (142), Expect = 1e-09 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 2 APSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 P+ C C ++TAEH L CP + RR L+ A +G D S ++ +L SDESW Sbjct: 972 EPTTRCHHCGHDLDTAEHTLAVCPAWEVQRRVLV-AKIGPDLSLPGVVASMLGSDESWKA 1030 Query: 62 I 62 + Sbjct: 1031 M 1031 >tr:Q9SLE9_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1319 Score = 58.4 bits (140), Expect = 3e-09 Identities = 12/61 (19%), Positives = 19/61 (31%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + C C +ET H+LF+CP ++ L F S + Sbjct: 1030 IRTADGCLFCKEEIETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQN 1089 Query: 61 R 61 Sbjct: 1090 F 1090 >tr:O01419_BOMMO Pol protein. Bombyx mori (Silk moth). Length = 1067 Score = 57.2 bits (137), Expect = 5e-09 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 P P C +C + A+H L CPR+ R+ L+ A +G D S ++ ++E + W Sbjct: 962 REPHPGCHQCGHPDDDAQHALEACPRWEYPRQSLV-AVLGADLSLPVVVSRMVEDERCWR 1020 Query: 61 RIQ 63 + Sbjct: 1021 AMA 1023 >tr:Q9BLI5_BOMMO TRAS3 protein. Bombyx mori (Silk moth). Length = 1682 Score = 56.5 bits (135), Expect = 1e-08 Identities = 15/63 (23%), Positives = 21/63 (33%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 SP C P ET HVL ECP FA+ R + + + + Sbjct: 1608 CKESPSCICDPAVKETVPHVLVECPIFAQARHDIEQKLDVKIGLDTLHEIIIDTNRNQFL 1667 Query: 61 RIQ 63 + Sbjct: 1668 KYC 1670 >tr:Q94H40_ORYSA Putative reverse transcriptase. Oryza sativa (Rice). Length = 1185 Score = 56.5 bits (135), Expect = 1e-08 Identities = 13/63 (20%), Positives = 22/63 (34%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 A CP C VE +H++F C R I ++L + +L + Sbjct: 895 IAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRSGSVLVEEMIRK 954 Query: 61 RIQ 63 + Sbjct: 955 GGK 957 >tr:Q9LJP6_ARATH Non-LTR retroelement reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 637 Score = 56.1 bits (134), Expect = 1e-08 Identities = 13/62 (20%), Positives = 20/62 (32%) Query: 2 APSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 C C +ET +H+ F CP ++I L + L D S Sbjct: 316 EARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSSWSLITPHLLDSSQPY 375 Query: 62 IQ 63 + Sbjct: 376 LH 377 >tr:Q851L3_ORYSA Hypothetical protein OSJNBa0042I09.31. Oryza sativa (japonica cultivar-group). Length = 350 Score = 55.7 bits (133), Expect = 2e-08 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 +A P C CP +ETA H++ C E+ ++L + S L D Sbjct: 178 WAIDPHCSSCPT-IETANHIILHCKLADEVWKKLN-LHMQAMSSANIQAFVELILDNMPE 235 Query: 61 RIQ 63 + + Sbjct: 236 QQK 238 >tr:Q9SIS9_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1715 Score = 55.7 bits (133), Expect = 2e-08 Identities = 15/50 (30%), Positives = 21/50 (42%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWL 52 P C RC A ET H++F C + R +G +NL E + Sbjct: 1422 ADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGSNRLCFTDNLEENI 1471 >tr:Q75LK1_ORYSA Hypothetical protein OSJNBa0096I06.4. Oryza sativa (japonica cultivar-group). Length = 332 Score = 55.3 bits (132), Expect = 2e-08 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 +A P C CP +ETA H++ C E+ ++L + S L D Sbjct: 178 WAIDPHCSSCPT-IETANHIILHCKLADEVWKKLN-LHMQAMSSANIQAFVELILDNMPE 235 Query: 61 RIQ 63 + + Sbjct: 236 QQK 238 >tr:Q93139_BOMMO ORF2. Bombyx mori (Silk moth). Length = 1162 Score = 54.9 bits (131), Expect = 3e-08 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 P C PG ET EH+L CP F + R L + + ENL + ++E Sbjct: 1097 CKGDPSCACEPGMPETVEHLLTSCPIFGKQRFELE-NKINKIVNKENLCKLIVEKYTKEL 1155 Query: 61 RI 62 I Sbjct: 1156 FI 1157 >tr:O18558_AEDAE Lian-Aa1 retrotransposon protein. Aedes aegypti (Yellowfever mosquito). Length = 1189 Score = 54.9 bits (131), Expect = 3e-08 Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 A S VC C T+ H++ CP F+++R +LL + + +L + + Sbjct: 1126 RADSFVCDSCDSDYGTSYHLICNCPVFSQMRFQLLGKHLLSETEFRSLNLQDILLFLTRC 1185 Query: 61 RIQ 63 + Sbjct: 1186 VNE 1188 >tr:Q5KTM7_BOMMO Reverse transcriptase (Fragment). Bombyx mori (Silk moth). Length = 321 Score = 54.2 bits (129), Expect = 4e-08 Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPG-AVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 P+P C C G +TAEH L CP FAE RR L+ A +G D S ++ +L SDESW Sbjct: 214 REPTPKCHHCSGCNEDTAEHTLACCPAFAEQRRVLV-AKIGPDLSLPTVVAAMLGSDESW 272 Query: 60 SRI 62 + Sbjct: 273 QAM 275 >tr:O64473_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1447 Score = 54.2 bits (129), Expect = 4e-08 Identities = 12/61 (19%), Positives = 24/61 (39%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 S C C ++ +H+ F CP +E+ + F+ + L S +R+ Sbjct: 1318 SSGSCVFCNHPTKSRDHLFFNCPYSSEVWTVTAKNILTTRFTTDWHLLLNTVSSLQQNRV 1377 Query: 63 Q 63 + Sbjct: 1378 E 1378 >tr:O82216_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1216 Score = 54.2 bits (129), Expect = 5e-08 Identities = 17/61 (27%), Positives = 24/61 (39%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 C C +ET +H+ F+C +EI + D FS + SD RI Sbjct: 816 TPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDRFSTKWSAVVNYISDSQPDRI 875 Query: 63 Q 63 Q Sbjct: 876 Q 876 >tr:Q9M1L6_ARATH Hypothetical protein F18P9_50. Arabidopsis thaliana (Mouse-ear cress). Length = 534 Score = 53.0 bits (126), Expect = 1e-07 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Query: 2 APSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 + C C A+ET EH+ F CP + + L +G F+ E + R Sbjct: 141 DANGGCSFCDEAMETREHIFFSCPYSSAVWSALTKDLLGQLFTTSW--ESMTALLTDPPR 198 >tr:Q9SHP2_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 773 Score = 52.6 bits (125), Expect = 2e-07 Identities = 16/59 (27%), Positives = 22/59 (37%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 C RC A E H+LF+C EI + D N LES + ++ Sbjct: 535 TDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQ 593 >tr:Q56W17_ARATH Hypothetical protein. Arabidopsis thaliana (Mouse-ear cress). Length = 478 Score = 52.2 bits (124), Expect = 2e-07 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 C C VET +H+ F CP AE+ L + F+ E +L+ + S Sbjct: 350 ADSSCVLCHHLVETRDHLFFTCPYSAEVWSTLTRKLLSQHFTNRW--EAILKLLTNKSLG 407 Query: 63 Q 63 Sbjct: 408 H 408 >tr:Q7XM87_ORYSA OSJNBb0060E08.12 protein. Oryza sativa (Rice). Length = 2113 Score = 51.8 bits (123), Expect = 2e-07 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 +A P C CP A+ETA H++ C EI +L S + L Sbjct: 2039 WASDPHCAVCP-AIETANHIILRCKLATEIWNKLN-LLDQAIQSADILQFTEHVL 2091 >tr:Q9FMM8_ARATH Non-LTR retroelement reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 308 Score = 51.8 bits (123), Expect = 3e-07 Identities = 18/63 (28%), Positives = 27/63 (42%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + S V G VE+ HV +CP I R +P F ++L EWL ++ S Sbjct: 11 LSASNVSQVYIGGVESVLHVFRDCPAQLGIWVRFVPRRRQQGFFSKSLFEWLYDNLCDRS 70 Query: 61 RIQ 63 + Sbjct: 71 SCE 73 >tr:Q9C8I3_ARATH Hypothetical protein F19C24.27. Arabidopsis thaliana (Mouse-ear cress). Length = 629 Score = 51.1 bits (121), Expect = 4e-07 Identities = 13/56 (23%), Positives = 22/56 (39%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 C C ++ET +H+ F C + I + + FS + S+ RI Sbjct: 504 CTFCSTSIETRDHLFFSCSYASAIWTAIAKNVLQHRFSTDWQTIVNYISETQTDRI 559 >tr:Q9T0D8_ARATH Hypothetical protein AT4g11710. Arabidopsis thaliana (Mouse-ear cress). Length = 473 Score = 51.1 bits (121), Expect = 4e-07 Identities = 15/63 (23%), Positives = 20/63 (31%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 C C A+E+ +H+ F CP EI L F + S Sbjct: 341 MGVDATCILCNKALESRDHLFFSCPFATEIWEPLAKTIYNTCFYTDWQTIINNVSRNWPD 400 Query: 61 RIQ 63 RI Sbjct: 401 RIA 403 >tr:O65246_ARATH F21E10.8 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 301 Score = 50.7 bits (120), Expect = 5e-07 Identities = 16/60 (26%), Positives = 23/60 (38%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 SP C RC E+ HVLF CP I R + ++ E + D ++ Sbjct: 24 SPYCSRCLTEEESICHVLFTCPYAMRIWRLSNLPQLTGLSITHDVEENISLLDAYYNNNH 83 >tr:Q9M1F2_ARATH Hypothetical protein F9K21.130. Arabidopsis thaliana (Mouse-ear cress). Length = 851 Score = 50.3 bits (119), Expect = 6e-07 Identities = 13/53 (24%), Positives = 17/53 (32%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 P CPRC E+ H LF CP R N+ + + Sbjct: 699 MRIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPLYRSSILSNNIEDNIS 751 >tr:Q9M3A4_ARATH Hypothetical protein F2K15.140. Arabidopsis thaliana (Mouse-ear cress). Length = 176 Score = 50.3 bits (119), Expect = 6e-07 Identities = 11/47 (23%), Positives = 18/47 (38%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEW 51 C C +ET EH+ F+CP + L + ++ L Sbjct: 69 TSCLLCNYPLETREHLFFQCPYSRTVWSELAGRLLASKYTDNWLDIM 115 >tr:Q9FNA7_ARATH Non-LTR retroelement reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 385 Score = 49.9 bits (118), Expect = 9e-07 Identities = 12/51 (23%), Positives = 20/51 (39%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 C C ET EH+ F+C ++ L+ + D +S L+ Sbjct: 254 TDTSCIFCKNPNETREHLFFQCVYTRKVWNGLIKGLLLDKYSDRWQDIILM 304 >tr:Q9SA04_ARATH F28K20.4 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 1253 Score = 49.5 bits (117), Expect = 1e-06 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 5/61 (8%) Query: 2 APSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 + C C E+ +H+L C A I + + +P + SW+R Sbjct: 959 TTTTDCCLCSSRPESRDHLLLYCVFSAVIWKLVFF-----RLTPSQAIFNSWAELLSWTR 1013 Query: 62 I 62 I Sbjct: 1014 I 1014 >tr:Q7XPS4_ORYSA OSJNBa0065O17.7 protein. Oryza sativa (japonica cultivar-group). Length = 3331 Score = 49.5 bits (117), Expect = 1e-06 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP---ENLLEWLLESDE 57 CP C +ETA H+L +C ++ R+L SP L +WL S Sbjct: 1553 IDSHSACPFCAQELETANHILIDCVFARQVWLRVLSPPGWAALSPPRGSWLQDWLSSSRI 1612 Query: 58 S 58 + Sbjct: 1613 T 1613 >tr:Q9LMC4_ARATH F14D16.18. Arabidopsis thaliana (Mouse-ear cress). Length = 582 Score = 49.2 bits (116), Expect = 2e-06 Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 +P C C +ET +H+ F CP ++ +L + F+ L D S+ + Sbjct: 439 TPNCILCQHTLETWDHLFFMCPYSFQVWTKLAKGILHASFTANWTETLKLIHDNRLSKTK 498 >tr:O65244_ARATH F21E10.5 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 928 Score = 48.8 bits (115), Expect = 2e-06 Identities = 12/62 (19%), Positives = 22/62 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 S C C +ET +H+ F C + I L + ++ + S + Sbjct: 797 LQSSVGCVLCNNNLETRDHLFFSCAYTSGIWEALAKNLLQRSYTTDWQTIISYVSGQCHD 856 Query: 61 RI 62 R+ Sbjct: 857 RV 858 >tr:Q9LPA1_ARATH T32E20.19. Arabidopsis thaliana (Mouse-ear cress). Length = 957 Score = 48.4 bits (114), Expect = 2e-06 Identities = 13/59 (22%), Positives = 22/59 (37%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 P+C RC E+ HVLF P + + + ++ E + +S S Sbjct: 778 DPICSRCSLEEESICHVLFNYPYATTTWKLAKLSYLSGHTFSNDVEENISVLIDSISNN 836 >tr:Q9SF52_ARATH Putative non-LTR reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 484 Score = 48.0 bits (113), Expect = 4e-06 Identities = 13/53 (24%), Positives = 19/53 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 P CPRC E+ H LF CP R + + + + E + Sbjct: 194 MRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENIS 246 >tr:Q9SKJ4_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1750 Score = 48.0 bits (113), Expect = 4e-06 Identities = 13/53 (24%), Positives = 19/53 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 P CPRC E+ H LF CP R + + + + E + Sbjct: 1460 MRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENIS 1512 >tr:Q7XJS2_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1344 Score = 46.8 bits (110), Expect = 8e-06 Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 1/57 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 C C ET H+LFECP ++ + ++ + + Sbjct: 1056 IRSDDGCLMCDTENETINHILFECPLARQVWA-ITHLSSAGSEFSNSVYTNMSRLID 1111 >tr:Q9FZF6_ARATH T2E6.13. Arabidopsis thaliana (Mouse-ear cress). Length = 165 Score = 46.5 bits (109), Expect = 9e-06 Identities = 13/56 (23%), Positives = 22/56 (39%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 C C ++ET +H+ F C + I + + FS + S+ RI Sbjct: 40 CTFCSTSIETRDHLFFSCSYASSIWTAIAKNVLQHRFSTDWQAIVNYISETQTDRI 95 >tr:Q9ZQF8_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1225 Score = 46.5 bits (109), Expect = 9e-06 Identities = 14/44 (31%), Positives = 18/44 (40%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLL 49 VCPRC E+ H+LF CP +I F +L Sbjct: 963 VCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLF 1006 >tr:Q9LJX3_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCE21 (Hypothetical protein). Arabidopsis thaliana (Mouse-ear cress). Length = 310 Score = 46.5 bits (109), Expect = 1e-05 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLE----SDESW 59 + C C +ET +H+ F C ++ + + FS + SD++ Sbjct: 179 NTSCSLCDEPMETRDHLFFVCTYSRKVWEDIAKPILQHRFSLDWKDILNYVCERDSDKTR 238 Query: 60 SRI 62 + I Sbjct: 239 NFI 241 >tr:Q9LQL9_ARATH F5D14.16 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 206 Score = 46.1 bits (108), Expect = 1e-05 Identities = 12/45 (26%), Positives = 19/45 (42%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C C +ET +H+ F+C +EI + D FS + Sbjct: 103 TPTTCVFCSSPMETRDHLFFQCHYSSEIWTSIAKNVYKDGFSTDW 147 >tr:Q9SIQ5_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1524 Score = 45.7 bits (107), Expect = 2e-05 Identities = 12/53 (22%), Positives = 19/53 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 P+CPRC E+ H LF CP + + + + E + Sbjct: 1234 MRIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIRNQLMSNDFEENIS 1286 >tr:Q6DYD9_ARATH Hypothetical protein. Arabidopsis thaliana (Mouse-ear cress). Length = 137 Score = 45.7 bits (107), Expect = 2e-05 Identities = 13/53 (24%), Positives = 21/53 (39%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 + C C +ET +H+ F CP +EI + D +S + S Sbjct: 8 ATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIFKDKYSTDWSQLLDHVS 60 >tr:Q9XEU4_ORYSA Putative reverse transcriptase. Oryza sativa (Rice). Length = 331 Score = 45.7 bits (107), Expect = 2e-05 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 + +P C CP A+ET+ H++ C E+ ++L S D Sbjct: 207 WDSNPHCMTCP-AIETSNHIILRCKLAGEVWKKLN-LYETAVRSSNIQDFVESILDTLPE 264 Query: 61 RIQ 63 + Sbjct: 265 HQK 267 >tr:Q9C7L9_ARATH Hypothetical protein F14C21.48. Arabidopsis thaliana (Mouse-ear cress). Length = 137 Score = 45.3 bits (106), Expect = 2e-05 Identities = 13/53 (24%), Positives = 21/53 (39%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 + C C +ET +H+ F CP +EI + D +S + S Sbjct: 8 ATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIFKDKYSTDWSQLLDHVS 60 >tr:O22220_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1094 Score = 45.3 bits (106), Expect = 2e-05 Identities = 11/50 (22%), Positives = 15/50 (30%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLE 54 C CP ET H+LF+CP ++ F Sbjct: 811 DGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNVNHV 860 >tr:Q6ID20_ARATH At3g42803. Arabidopsis thaliana (Mouse-ear cress). Length = 146 Score = 45.3 bits (106), Expect = 2e-05 Identities = 13/44 (29%), Positives = 18/44 (40%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLL 49 CP C ET H+LF C + L +G+ F +L Sbjct: 83 GCPHCGEVEETINHLLFHCLPSRQTWALSLIPTLGNIFPRNSLF 126 >tr:Q5Q0G1_ARATH Hypothetical protein. Arabidopsis thaliana (Mouse-ear cress). Length = 152 Score = 45.3 bits (106), Expect = 2e-05 Identities = 15/57 (26%), Positives = 23/57 (40%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 C C VET H+ F C A++ L + FS + + L +D S + Sbjct: 27 CVFCHAPVETRNHLFFACQYSADVWTGLSRKLLSQRFSTDWDMIIKLITDTSLGKGC 83 >tr:Q9ZQG1_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1138 Score = 44.9 bits (105), Expect = 3e-05 Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + P C C E+ HVLF C ++ Sbjct: 854 MSIDPRCQICGDEGESTNHVLFTCSMARQVW 884 >tr:Q9C697_ARATH Reverse transcriptase, putative; 16838-20266. Arabidopsis thaliana (Mouse-ear cress). Length = 1142 Score = 44.5 bits (104), Expect = 3e-05 Identities = 10/47 (21%), Positives = 16/47 (34%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWL 52 C C + E+ H LF+C +I F ++ L Sbjct: 865 GCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNL 911 >tr:Q9LQF1_ARATH F15O4.34. Arabidopsis thaliana (Mouse-ear cress). Length = 236 Score = 44.5 bits (104), Expect = 4e-05 Identities = 14/44 (31%), Positives = 18/44 (40%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 S C C A ET +H+ F C + + L GD FS Sbjct: 141 SAACVLCHNAPETRDHLFFSCDFASIVWSNLARGIYGDRFSTHW 184 >tr:Q9LSE9_ARATH Reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 343 Score = 44.1 bits (103), Expect = 5e-05 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAG---VGDDFSPENLLEWLLES 55 P C RC ET++H+ F+C ++ R + E +E LL S Sbjct: 53 HPQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSS 107 >tr:Q9LVT7_ARATH Similarity to non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 329 Score = 43.8 bits (102), Expect = 6e-05 Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIR 31 CPRC ET H++FECP ++ Sbjct: 51 CPRCGADEETINHLIFECPPARQVW 75 >tr:Q9SJ38_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1229 Score = 43.8 bits (102), Expect = 7e-05 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 +PS C RC GA E+ H+ F C A++ Sbjct: 966 ISPSAACHRC-GAPESTTHLFFHCEFAAQVWE 996 >tr:Q9FL83_ARATH Non-LTR retroelement reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 1223 Score = 43.8 bits (102), Expect = 7e-05 Identities = 10/47 (21%), Positives = 16/47 (34%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEW 51 C C G +ET +H+ F C + I L ++ Sbjct: 1096 TDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSII 1142 >tr:Q8LK27_BRANA Putative AP endonuclease/reverse transcriptase. Brassica napus (Rape). Length = 1214 Score = 43.4 bits (101), Expect = 9e-05 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN--LLEWLLESDESWSR 61 C C ET +H+ C + I +++L E ++EW+L + S+S Sbjct: 1093 CCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIEWMLSNQGSFSG 1149 >tr:Q75LZ3_ORYSA Hypothetical protein P0676G05.18. Oryza sativa (japonica cultivar-group). Length = 493 Score = 43.4 bits (101), Expect = 9e-05 Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + S +CP C ETA H+L EC ++ R++ Sbjct: 374 WDNSHICPLCGVEPETATHLLMECAFAKQVWRQI 407 >tr:Q7XNY0_ORYSA OSJNBb0015N08.11 protein (OSJNBa0035M09.1 protein). Oryza sativa (japonica cultivar-group). Length = 1026 Score = 42.2 bits (98), Expect = 2e-04 Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 7/57 (12%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR------RLLPAGVGDDFSPENLLEW 51 C C VET +H+ F+CP I + P D + Sbjct: 877 RKGDNKCQFC-DKVETVQHLFFDCPLARLIWNIIACALNVKPVLSRQDLFGSWIQSM 932 >tr:Q8RUE6_ARATH Putative reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 138 Score = 41.8 bits (97), Expect = 2e-04 Identities = 11/39 (28%), Positives = 16/39 (41%) Query: 9 RCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C VET EH+ F P ++ L +G F+ Sbjct: 6 FCQEVVETREHLFFSRPYSTQVWSALTQDMLGLWFTTRW 44 >tr:Q64M76_ORYSA Phosphoribosyl pyrophosphate synthase-like. Oryza sativa (japonica cultivar-group). Length = 183 Score = 41.8 bits (97), Expect = 3e-04 Identities = 13/42 (30%), Positives = 17/42 (40%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDD 42 P+P C C A ETA H+ F+CP + D Sbjct: 42 IVPAPTCELCNSADETALHLCFQCPFAVTFWSAMNIPSQPDG 83 >tr:O22148_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1374 Score = 41.8 bits (97), Expect = 3e-04 Identities = 13/47 (27%), Positives = 17/47 (36%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 C RCP ET H+LF+CP E+L + Sbjct: 1092 CVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFRNMH 1138 >tr:Q9LXW5_ARATH Hypothetical protein T15B3_80. Arabidopsis thaliana (Mouse-ear cress). Length = 202 Score = 41.8 bits (97), Expect = 3e-04 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECP--RFAEIRRRL 34 S +C C A ET H+L +CP + E R RL Sbjct: 70 IRESEICQVCKAASETIIHLLRDCPDGWYLEERVRL 105 >tr:Q7M4J4_BOMMO RNA-directed DNA polymerase (EC 2.7.7.49) homolog (R1). Bombyx mori (Silk moth). Length = 1051 Score = 41.4 bits (96), Expect = 3e-04 Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 10 CPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 C E +HVL+ECP + EIR R+L + P Sbjct: 961 CGAVEEDRDHVLWECPLYDEIRGRMLDGISRSEVGP 996 >tr:Q9MAK3_ARATH F27F5.14. Arabidopsis thaliana (Mouse-ear cress). Length = 386 Score = 41.4 bits (96), Expect = 3e-04 Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIR 31 C C ET +HV F+CP E+ Sbjct: 284 CLLCNALDETRQHVFFDCPFSHEVW 308 >tr:Q5NTZ0_BOMMO Non-LTR retrotransposon R1Bmks ORF2 protein. Bombyx mori (Silk moth). Length = 1035 Score = 41.4 bits (96), Expect = 3e-04 Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 10 CPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 C E +HVL+ECP + EIR R+L + P Sbjct: 958 CGAVEEDRDHVLWECPLYDEIRGRMLDGISRSEVGP 993 >tr:O81068_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1529 Score = 41.4 bits (96), Expect = 3e-04 Identities = 10/42 (23%), Positives = 18/42 (42%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C C A ET +H+ F C + + L + ++S + Sbjct: 1395 TCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDW 1436 >tr:Q9C6L3_ARATH Hypothetical protein F2J7.11. Arabidopsis thaliana (Mouse-ear cress). Length = 1213 Score = 41.1 bits (95), Expect = 4e-04 Identities = 11/59 (18%), Positives = 17/59 (28%), Gaps = 1/59 (1%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGV-GDDFSPENLLEWLLESDESWSR 61 S C C A E+ +H+L C A++ R + S Sbjct: 1090 SDACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEA 1148 >tr:Q6K4X1_ORYSA Hypothetical protein OSJNBa0035A24.33. Oryza sativa (japonica cultivar-group). Length = 162 Score = 41.1 bits (95), Expect = 4e-04 Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 S +CP C ETA H+L +C ++ + Sbjct: 50 SEICPLCGIEPETAHHLLMDCAFARQVWSSI 80 >tr:Q7XMF6_ORYSA OSJNBa0061G20.3 protein. Oryza sativa (japonica cultivar-group). Length = 1463 Score = 41.1 bits (95), Expect = 4e-04 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAG-VGDDFSPENLLEWLLESDESWSRIQ 63 C C +E A+H+ +CP EI +++ F N E L++ ES ++ Q Sbjct: 1344 CQLCYRNLEMAQHLFKDCPFTREIWDKIMARMNHNQPFPVHNTDESLVDWWESRTKQQ 1401 >tr:Q9SY58_ARATH F14N23.4. Arabidopsis thaliana (Mouse-ear cress). Length = 1161 Score = 41.1 bits (95), Expect = 4e-04 Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 F+ P C C E+ EH+ F C +EI Sbjct: 1022 FSIPPTCVLCNDLDESREHLFFRCQFSSEIW 1052 >tr:Q9LNZ2_ARATH F9C16.26. Arabidopsis thaliana (Mouse-ear cress). Length = 1902 Score = 41.1 bits (95), Expect = 4e-04 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPA-GVGDDFSPENLLEWL 52 C C ET +H+ F+C +++ R + A G+ FS ++ L W+ Sbjct: 1774 CVLCNSCDETRDHLFFDCHFSSQVWRFFISASGLSPPFSFKDSLLWM 1820 >tr:Q9MFF1_BETVU Orf315 protein. Beta vulgaris subsp. vulgaris. Length = 315 Score = 41.1 bits (95), Expect = 4e-04 Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 A PVC C E+A+H+ F C ++ Sbjct: 59 LACDPVCVLCGQGAESAQHLFFACEYSQQVW 89 >tr:Q6YBU8_LYMDI Reverse transcriptase/integrase. Lymantria dispar (Gypsy moth). Length = 136 Score = 41.1 bits (95), Expect = 4e-04 Identities = 12/35 (34%), Positives = 17/35 (48%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLL 35 +P C C +TA+H L EC + RR L+ Sbjct: 35 RESTPFCHHCSCDEDTAQHTLEECAAWEGERRELV 69 >tr:Q9NBJ4_DROAN Reverse transcriptase (Fragment). Drosophila ananassae (Fruit fly). Length = 354 Score = 41.1 bits (95), Expect = 4e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESD 56 A SP C RC ET +HVL ECP + ++R L GV + + L SD Sbjct: 282 LAGSPEC-RCGSRQETWKHVLCECPLYDDLR-DLGGLGVVQAGGDFDFSQVLSTSD 335 >tr:Q9XIG3_ARATH T10P12.5 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 355 Score = 41.1 bits (95), Expect = 4e-04 Identities = 9/45 (20%), Positives = 17/45 (37%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C C +ET +H+ F C +I + +G ++ Sbjct: 209 ADSTCVFCQDPLETRDHLFFHCHYANQIWEIIAKGFMGVQYTSNW 253 >tr:Q8LK00_SORBI Putative reverse transcriptase. Sorghum bicolor (Sorghum) (Sorghum vulgare). Length = 1323 Score = 41.1 bits (95), Expect = 4e-04 Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRR 32 C C +ETA H+ FECP + + Sbjct: 1201 CALCERNLETAHHLFFECPYSRLVWQ 1226 >tr:Q53K65_ORYSA Hypothetical protein. Oryza sativa (japonica cultivar-group). Length = 1090 Score = 41.1 bits (95), Expect = 5e-04 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 C C +ETA+H+ ECP +I F + LL + W Sbjct: 964 CQLCFRNLETAQHLFKECPFVQQIWNEARRQIRPRRFQDSSEDGTLL---DWWRSQT 1017 >tr:O80781_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 292 Score = 40.7 bits (94), Expect = 5e-04 Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIR 31 C RCP + ET H+LF+C + Sbjct: 10 ASCVRCPDSRETVNHLLFKCCFARLVW 36 >tr:Q6I5S8_ORYSA Putative polyprotein. Oryza sativa (japonica cultivar-group). Length = 1419 Score = 40.7 bits (94), Expect = 5e-04 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDF----SPENLLEW 51 C C +ET +H+ ECP ++ R + F + LL W Sbjct: 325 CQLCFRNLETVQHLFMECPFTQQVWRDIGRKFRPQRFLHVTTDNTLLNW 373 >tr:Q7XET4_ORYSA Contains similarity to non-LTR reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 379 Score = 40.3 bits (93), Expect = 7e-04 Identities = 13/43 (30%), Positives = 19/43 (44%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDF 43 P+ +C C GA ETA H+ F CP ++ + D Sbjct: 298 IVPNDICDICNGATETASHLCFFCPFAKSFWDKIGVQPMIQDV 340 >tr:Q76IK6_CIOIN Pol-like protein. Ciona intestinalis. Length = 1239 Score = 40.3 bits (93), Expect = 8e-04 Identities = 10/45 (22%), Positives = 16/45 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 S C C A+ET H+ CP+ + + +P Sbjct: 1149 IVDSGQCVFCESALETVHHIFCTCPKVILFWKEVSDWICATLRTP 1193 >tr:O80591_ARATH T27I1.2 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 374 Score = 40.3 bits (93), Expect = 8e-04 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 + + C RC GA ET+ H+LF C A++ L L Sbjct: 27 ISSTWDCARC-GAPETSTHMLFHCDFAAQVWNLAPLQLGHIPIGTPILEALNL 78 >tr:Q851P0_ORYSA Hypothetical protein OSJNBa0042I09.4. Oryza sativa (japonica cultivar-group). Length = 334 Score = 39.9 bits (92), Expect = 8e-04 Identities = 10/37 (27%), Positives = 16/37 (43%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPA 37 CP C +ETA H+L + ++ R+L Sbjct: 95 IDSHSTCPFCAQELETANHILLDYVFARQVWLRVLSP 131 >tr:Q9LH44_ARATH Copia-like retrotransposable element. Arabidopsis thaliana (Mouse-ear cress). Length = 1499 Score = 39.9 bits (92), Expect = 9e-04 Identities = 8/38 (21%), Positives = 14/38 (36%) Query: 11 PGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENL 48 +ET H+ F C EI L + ++ + Sbjct: 1398 KEPMETRNHLFFSCRYSQEIWSGLTSNLLTSHYTTDWT 1435 >tr:Q5H9Y7_ORYSA P0650D04.15 protein. Oryza sativa (Rice). Length = 1579 Score = 39.9 bits (92), Expect = 0.001 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + S C C G +ET H+LF CP + Sbjct: 1439 WEGSEFCQLC-GELETTNHILFNCPMARFVW 1468 >tr:Q5U6D4_BETVU Orf147a protein. Beta vulgaris subsp. vulgaris. Length = 147 Score = 39.9 bits (92), Expect = 0.001 Identities = 11/41 (26%), Positives = 15/41 (36%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C C ET +H+ F C EI LL + + Sbjct: 43 CVLCGNVDETRDHLFFVCEFSYEIWSSLLCWLGIQRTAGDW 83 >tr:Q8SA93_MAIZE Putative polyprotein. Zea mays (Maize). Length = 2749 Score = 39.9 bits (92), Expect = 0.001 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 3/57 (5%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 CP C ET +H+L C E +LL +P++ E W + Sbjct: 2623 CPLCDQDQETLDHMLIGCVFAREFWFKLLLQVNLQFLAPQSED---SAFLEWWRMLC 2676 >tr:Q8S7Y0_ORYSA Putative retroelement. Oryza sativa (Rice). Length = 335 Score = 39.1 bits (90), Expect = 0.002 Identities = 12/46 (26%), Positives = 18/46 (39%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 P C +ETA H+L +C ++ R+L SP Sbjct: 226 LDSHSASPFCGQELETANHILLDCIFARQVWLRVLSPLGWTTLSPP 271 >tr:Q7XHA9_ORYSA Putative retroelement. Oryza sativa (japonica cultivar-group). Length = 335 Score = 39.1 bits (90), Expect = 0.002 Identities = 12/46 (26%), Positives = 18/46 (39%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 P C +ETA H+L +C ++ R+L SP Sbjct: 226 LDSHSASPFCGQELETANHILLDCIFARQVWLRVLSPLGWTTLSPP 271 >tr:Q9FW98_ORYSA Putative non-LTR retroelement reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1382 Score = 38.8 bits (89), Expect = 0.002 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + C C +T EHV CP A+I + Sbjct: 1100 STDGCVFCN-RDDTVEHVFLFCPFAAQIWEEI 1130 >tr:Q9LVQ1_ARATH Non-LTR retroelement reverse transcriptase-like. Arabidopsis thaliana (Mouse-ear cress). Length = 1072 Score = 38.8 bits (89), Expect = 0.002 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 S C C ET +H+L C +++ R + P L SW+ Sbjct: 946 LVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLC-----PRQRLLCTWAELLSWT 1000 Query: 61 RI 62 R Sbjct: 1001 RQ 1002 >tr:Q60DM2_ORYSA F-box domain containing protein. Oryza sativa (japonica cultivar-group). Length = 855 Score = 38.8 bits (89), Expect = 0.002 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + C C +T EHV CP A+I + Sbjct: 573 STDGCVFCN-RDDTVEHVFLFCPFAAQIWEEI 603 >tr:Q7XT18_ORYSA OSJNBb0050O03.4 protein. Oryza sativa (japonica cultivar-group). Length = 1199 Score = 38.8 bits (89), Expect = 0.002 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 8 PRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP---ENLLEWLLESDES 58 P C +ETA H+L +C ++ R+L SP L +W S Sbjct: 1062 PFCAQELETANHILIDCVFTRQVWLRVLSPPGWAALSPPRGSWLQDWWSSSRVC 1115 >tr:O64724_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 211 Score = 38.4 bits (88), Expect = 0.002 Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIR 31 P+C C ET +H+ F+C E+ Sbjct: 83 PLCLFCNTHDETRQHLFFDCEFAREVW 109 >tr:Q8H992_ORYSA Oryza sativa (japonica cultivar-group) retrotransposon Karma DNA, complete sequence. Oryza sativa (japonica cultivar-group). Length = 1197 Score = 38.4 bits (88), Expect = 0.002 Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + C C ETA+H+ F CP + L Sbjct: 1071 TATCDICSTTDETADHLSFNCPFAISFWQAL 1101 >tr:Q7Y193_ORYSA Putative reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 404 Score = 38.4 bits (88), Expect = 0.003 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + C C +T EHV CP A+I + Sbjct: 122 STDGCVFCN-RDDTVEHVFLFCPFAAQIWEEI 152 >tr:Q8H0A5_ORYSA Retrotransposon protein, putative, unclassified (Putative reverse transcriptase). Oryza sativa (japonica cultivar-group). Length = 1557 Score = 38.0 bits (87), Expect = 0.003 Identities = 12/63 (19%), Positives = 15/63 (23%), Gaps = 6/63 (9%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR------RRLLPAGVGDDFSPENLLEWLLE 54 S C C E H L CP+ + L P L L Sbjct: 1445 LEISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRMDDHLLGPSWLFNRLAL 1504 Query: 55 SDE 57 + Sbjct: 1505 LPD 1507 >tr:Q9ZVF0_ARATH Putative non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1449 Score = 38.0 bits (87), Expect = 0.004 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 C C A E+ +H+ F C +E+ + +S + L + E+W Sbjct: 1323 TCLLCRNATESRDHLFFSCSFSSEVWEMSAKSIYKSSYSTDWR-HLLTKIQENWK 1376 >tr:Q9FYJ4_ARATH F17F8.5. Arabidopsis thaliana (Mouse-ear cress). Length = 872 Score = 38.0 bits (87), Expect = 0.004 Identities = 12/62 (19%), Positives = 20/62 (32%) Query: 2 APSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSR 61 + S C C +T EH+ F C + + L +S S R Sbjct: 742 SVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLLTHISTHFQDR 801 Query: 62 IQ 63 ++ Sbjct: 802 VE 803 >tr:Q9LHK6_ARATH Similarity to non-LTR retroelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 332 Score = 37.6 bits (86), Expect = 0.005 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIR 31 C RC G +E A H+ F CP ++ Sbjct: 168 TGCKRC-GEIEDALHIFFRCPIAVKVW 193 >tr:Q9NBI8_9DIPT Reverse transcriptase (Fragment). Drosophila orientacea. Length = 379 Score = 37.6 bits (86), Expect = 0.005 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + +P C C E + HVL ECP +A++R Sbjct: 282 LSETPTCT-CGAVSEDSLHVLCECPLYADLR 311 >tr:Q9NBJ0_9DIPT Reverse transcriptase (Fragment). Drosophila neotestacea. Length = 377 Score = 37.6 bits (86), Expect = 0.005 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + +P C C E + HVL ECP +A++R Sbjct: 280 LSETPTCT-CGAVSEDSLHVLCECPLYADLR 309 >tr:Q8RV54_ORYSA Reverse transcriptase-like protein. Oryza sativa (japonica cultivar-group). Length = 277 Score = 37.6 bits (86), Expect = 0.005 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 ++ P CP CP A+E+A+H++ C + ++ + + + + + Sbjct: 188 WSKDPHCPLCP-ALESADHIIQRCKNANSLWEKMNLLHLANHSESSSAFLQAVVDRNHSN 246 Query: 61 R 61 R Sbjct: 247 R 247 >tr:Q9FJA4_ARATH Non-LTR retroelement reverse transcriptase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 1197 Score = 37.6 bits (86), Expect = 0.005 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 PVC RC G +ET+ H LF C + RL P D F L+ ++ SW + + Sbjct: 908 DPVCCRC-GELETSSHALFNCMFVQRVW-RLAPLEGIDLF----LVFTDVKLGLSWLKKK 961 >tr:Q9C7N6_ARATH Reverse transcriptase, putative; 100033-105622. Arabidopsis thaliana (Mouse-ear cress). Length = 1557 Score = 37.6 bits (86), Expect = 0.005 Identities = 9/26 (34%), Positives = 11/26 (42%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAE 29 P C C E+ HVLF C + Sbjct: 1355 DPCCQICGQEGESINHVLFTCSVARQ 1380 >tr:Q9NBI0_9DIPT Reverse transcriptase (Fragment). Drosophila testacea. Length = 378 Score = 37.2 bits (85), Expect = 0.005 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + +P C C E + HVL ECP +A++R Sbjct: 281 LSETPTCT-CGAVSEDSLHVLCECPLYADLR 310 >tr:O64612_ARATH Putative reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1412 Score = 37.2 bits (85), Expect = 0.005 Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 S VC C + E+ +H+ F C + I Sbjct: 1275 RGISSVCVLCNISAESRDHLFFSCNFSSHIW 1305 >tr:Q53JP3_ORYSA Hypothetical protein. Oryza sativa (japonica cultivar-group). Length = 1063 Score = 37.2 bits (85), Expect = 0.006 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 7/66 (10%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRR------LLPAGVGDDFSPE-NLLEWLL 53 S VC C E H L+ CP+ ++ L PA VG P L +L Sbjct: 758 LEASEVCKICGIEKEDTIHALYRCPQARQLWILMRDVIYLDPAVVGRCTGPNRVLDLLML 817 Query: 54 ESDESW 59 +++ Sbjct: 818 LPEDNR 823 >tr:Q9SK98_ARATH Very similar to retrotransposon reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 1231 Score = 37.2 bits (85), Expect = 0.007 Identities = 10/50 (20%), Positives = 16/50 (32%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLL 53 C C E+ +HVLF C ++ F ++ L Sbjct: 929 DSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFECGSVYANLY 978 >tr:Q5B300_EMENI Hypothetical protein. Aspergillus nidulans FGSC A4. Length = 804 Score = 37.2 bits (85), Expect = 0.007 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDD 42 P+ C C A ++ H+L CP F+ +R + G Sbjct: 403 PNSDCQ-CGRATQSVRHILLACPTFSGLREEIFGGRSGGP 441 >tr:Q84Q64_ORYSA Hypothetical protein OSJNBa0071M09.16. Oryza sativa (japonica cultivar-group). Length = 1143 Score = 36.8 bits (84), Expect = 0.007 Identities = 12/45 (26%), Positives = 17/45 (37%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 + + CP C ETA H++ C I R + F P Sbjct: 1015 WRNNGHCPLCRCDTETALHLVAMCRYTKRIWRLVATWAGYQQFEP 1059 >tr:Q7F805_ORYSA Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09. Oryza sativa (japonica cultivar-group). Length = 985 Score = 36.8 bits (84), Expect = 0.007 Identities = 10/42 (23%), Positives = 15/42 (35%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 VCP C E+ H+L +C I + D + Sbjct: 861 VCPLCRTIDESVLHLLAKCRVTKRIWAEIQRWTHTDLQMDKW 902 >tr:Q5ZDG9_ORYSA Hypothetical protein P0480E02.9. Oryza sativa (japonica cultivar-group). Length = 385 Score = 36.8 bits (84), Expect = 0.008 Identities = 11/26 (42%), Positives = 13/26 (50%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIR 31 +CP C ETA H+L EC I Sbjct: 268 ICPLCRHRQETAIHLLAECRYTRRIW 293 >tr:Q53KA7_ORYSA Hypothetical protein. Oryza sativa (japonica cultivar-group). Length = 148 Score = 36.8 bits (84), Expect = 0.008 Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEI 30 + S +CP C ETA H+L +C ++ Sbjct: 119 WDNSRICPLCGVEPETATHLLMDCTFTKQV 148 >tr:Q7Y1F8_ORYSA Putative reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1014 Score = 36.8 bits (84), Expect = 0.008 Identities = 13/52 (25%), Positives = 21/52 (40%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDES 58 C C +ETA H+ +ECP +I + P+N + + D Sbjct: 908 CQLCFRNLETAHHLFYECPITRKIWDAIATRLGMPQLRPQNWSKTTILEDRW 959 >tr:Q7PVA9_ANOGA ENSANGP00000013352 (Fragment). Anopheles gambiae str. PEST. Length = 1215 Score = 36.8 bits (84), Expect = 0.008 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENL 48 P+CP C A T +H+L ECP + R +L + + + Sbjct: 1154 PICPYCA-ADTTVKHLLIECPEYDNTRAKLNLSKHIEQVLQNDT 1196 >tr:Q9SZD8_ARATH Hypothetical protein F19B15.120 (Hypothetical protein AT4g29090). Arabidopsis thaliana (Mouse-ear cress). Length = 575 Score = 36.8 bits (84), Expect = 0.009 Identities = 10/25 (40%), Positives = 12/25 (48%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIR 31 C RCP ET H+LF+C Sbjct: 295 CIRCPSCKETVNHLLFKCTFARLTW 319 >tr:Q8H031_ORYSA Putative retroelement. Oryza sativa (japonica cultivar-group). Length = 387 Score = 36.4 bits (83), Expect = 0.010 Identities = 9/34 (26%), Positives = 13/34 (38%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLP 36 P+P C C +E H+ CP A + Sbjct: 263 PTPTCELCNANLEDTYHIFLRCPMAAAFWNMIQI 296 >tr:Q947X7_ORYSA Hypothetical protein OSJNBa0067N01.20. Oryza sativa (Rice). Length = 387 Score = 36.4 bits (83), Expect = 0.010 Identities = 9/34 (26%), Positives = 13/34 (38%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLP 36 P+P C C +E H+ CP A + Sbjct: 263 PTPTCELCNANLEDTYHIFLRCPMAAAFWNMIQI 296 >tr:Q76IK9_BRARE Pol-like protein. Brachydanio rerio (Zebrafish) (Danio rerio). Length = 1148 Score = 36.4 bits (83), Expect = 0.010 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 1 FAPSPVCPRCP-GAVETAEHVLFECPRFAEIRRRLLPAGVG 40 A +PVCPR G ET H+L+EC ++ R P Sbjct: 1009 MARNPVCPRAGCGCPETVRHLLWECGAARDLWARTGPLYHQ 1049 >tr:O81284_ARATH T14P8.10 (AT4g02490 protein). Arabidopsis thaliana (Mouse-ear cress). Length = 657 Score = 36.4 bits (83), Expect = 0.011 Identities = 8/27 (29%), Positives = 11/27 (40%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIR 31 C C ET +H+ F C + I Sbjct: 622 AECVLCNLVDETRDHLFFACRFSSRIW 648 >tr:Q53PW4_ORYSA Hypothetical protein. Oryza sativa (japonica cultivar-group). Length = 289 Score = 36.1 bits (82), Expect = 0.013 Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRR 32 C C + EHV CP A + + Sbjct: 223 GCIFCGH-DDRIEHVFLVCPYAATVWK 248 >tr:Q9NBJ3_9DIPT Reverse transcriptase (Fragment). Drosophila brachynephros. Length = 366 Score = 36.1 bits (82), Expect = 0.013 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + +P CP C E HVL CP +A++R Sbjct: 281 LSETPACP-CGAEREDWLHVLCVCPLYADLRF 311 >tr:Q84JX8_ORYSA Putative reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1349 Score = 36.1 bits (82), Expect = 0.014 Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 8/65 (12%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIR--------RRLLPAGVGDDFSPENLLEWLLESDE 57 +C C A E A H+ ECP + +L + + S + + Sbjct: 1239 ICSLCNSAFEDAAHLAKECPFTVTVWTQICIWMNFQLPQHHLQGNLSDWWSSFCTISPRQ 1298 Query: 58 SWSRI 62 + +++ Sbjct: 1299 NRNKV 1303 >tr:Q8H0A6_ORYSA Hypothetical protein. Oryza sativa (japonica cultivar-group). Length = 90 Score = 36.1 bits (82), Expect = 0.014 Identities = 9/30 (30%), Positives = 14/30 (46%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEI 30 CP C +ETA H+L +C ++ Sbjct: 61 IDSHSACPFCAQELETANHILLDCVFARQV 90 >tr:Q9SXN3_BRACM SAE1-S9-protein. Brassica campestris (Field mustard). Length = 255 Score = 35.7 bits (81), Expect = 0.017 Identities = 9/31 (29%), Positives = 12/31 (38%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 C C G VE+ H+ FEC + Sbjct: 164 LTVPNSCVLCNGGVESHSHLFFECSFAVGVW 194 >tr:Q76IK7_CIOIN Pol-like protein. Ciona intestinalis. Length = 1235 Score = 35.7 bits (81), Expect = 0.018 Identities = 7/37 (18%), Positives = 12/37 (32%) Query: 3 PSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGV 39 SP C C ++ H+ +C + V Sbjct: 1126 DSPNCVFCNTETDSLVHMFTKCKMIQSFWENINGWIV 1162 >tr:Q9ZVH1_ARATH T2P11.5 protein. Arabidopsis thaliana (Mouse-ear cress). Length = 240 Score = 35.7 bits (81), Expect = 0.019 Identities = 10/32 (31%), Positives = 11/32 (34%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPA 37 C RC ET H LF C +I Sbjct: 55 GCSRCGALEETINHTLFLCHPARQIWALSQIP 86 >tr:Q6H671_ORYSA Hypothetical protein OJ1112_F09.38 (Hypothetical protein P0708H12.17). Oryza sativa (japonica cultivar-group). Length = 60 Score = 35.7 bits (81), Expect = 0.019 Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 PVC C +E H+L +C ++ R+L + SP Sbjct: 10 IDSHPVCSFCAQELEMTNHILLDCVFAWQVWLRVLSSSGWAALSPP 55 >tr:Q5SMW3_ORYSA Cyst nematode resistance protein-like. Oryza sativa (japonica cultivar-group). Length = 185 Score = 35.7 bits (81), Expect = 0.020 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 1/58 (1%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 +CP C ETA H+L C + L + +P + D W Sbjct: 63 ICPLCRRTQETALHLLAACRYTRRVWAALAEWVTCEQLNPSQWRQTSTVLD-WWEATA 119 >tr:Q5ZCK2_ORYSA Rust resistance protein Rp1-dp8-like. Oryza sativa (japonica cultivar-group). Length = 1374 Score = 35.7 bits (81), Expect = 0.020 Identities = 11/32 (34%), Positives = 13/32 (40%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPA 37 +CP C ETA H+L C I L Sbjct: 1268 ICPLCRRVQETALHLLAGCRYTKRIWATLAEW 1299 >tr:Q7XNI4_ORYSA OSJNBb0032D24.9 protein. Oryza sativa (japonica cultivar-group). Length = 221 Score = 35.7 bits (81), Expect = 0.020 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 8/52 (15%) Query: 1 FAPSPVCPRCPGAVETAEHVLFEC-------PRFAEIRRRLLPAGVGDDFSP 45 + S C C ET +H+ F+C +A+ LL G + Sbjct: 154 WKGSIKCCFCNSN-ETIQHLFFDCHLVIFKGTYWAQQWSLLLKEEDGHKLNE 204 >tr:Q53NR1_ORYSA Retrotransposon protein, putative, unclassified. Oryza sativa (japonica cultivar-group). Length = 281 Score = 35.3 bits (80), Expect = 0.022 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 7/51 (13%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRR------RLLPAGVGDDFSPENLLEW 51 C C ET +H+ F+ P + L PA + + L + Sbjct: 187 CQLC-DREETVQHLFFDRPLARLMWNTAICVLNLNPALDSQNIFGDWLEKL 236 >tr:Q65WR1_ORYSA Putative polyprotein. Oryza sativa (japonica cultivar-group). Length = 1023 Score = 35.3 bits (80), Expect = 0.022 Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 + + CP C ETA H++ C I R + P Sbjct: 895 WRNNGHCPLCRCDTETALHLVAMCRYTKRIWRLVATWAGYQQLEP 939 >tr:Q54GK0_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 494 Score = 35.3 bits (80), Expect = 0.024 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 FAPSPVCPRCPGAVETAEHVLFEC---------PRFAEIRRRLLPAGVGD 41 FA C C A E+ EH++ +C PR I + ++ + Sbjct: 105 FAGDRRCRLCSTAEESIEHLVSDCASLYKSGVIPRHDGIVKEIVKTLINR 154 >tr:Q5TRT5_ANOGA ENSANGP00000028602. Anopheles gambiae str. PEST. Length = 267 Score = 35.3 bits (80), Expect = 0.025 Identities = 12/19 (63%), Positives = 12/19 (63%) Query: 5 PVCPRCPGAVETAEHVLFE 23 P CP C AVE EHVLF Sbjct: 238 PNCPECRDAVEDVEHVLFH 256 >tr:Q8H044_ORYSA Putative reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1183 Score = 34.9 bits (79), Expect = 0.028 Identities = 9/41 (21%), Positives = 13/41 (31%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 CP C ET H++ +C I + P Sbjct: 791 HCPLCRSEPETGIHLVGKCRYTKRIWSLVASWTGYQQLEPN 831 >tr:Q8S6P1_ORYSA Putative reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1509 Score = 34.9 bits (79), Expect = 0.029 Identities = 10/59 (16%), Positives = 20/59 (33%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 C C E A H+ F+C ++ + L + + + +L+S Sbjct: 1282 MDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCR 1340 >tr:Q50SW4_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 244 Score = 34.9 bits (79), Expect = 0.031 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 24 CPLCKDEIATVEHILLSC 41 >tr:Q9SZ87_ARATH RNA-directed DNA polymerase-like protein. Arabidopsis thaliana (Mouse-ear cress). Length = 1274 Score = 34.9 bits (79), Expect = 0.031 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 C RC G E++ H++ CP ++ L P + + + LL Sbjct: 1011 TCKRC-GQTESSLHLMLLCPYAKKVW-ELAPVLFNPSEATHSSVALLLVD 1058 >tr:Q7YXU7_DUGTI ORF2 (Fragment). Dugesia tigrina (Planarian). Length = 1171 Score = 34.9 bits (79), Expect = 0.031 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFA---EIRRRLLPAGVGDDFSP 45 F+ S +C +C G ET H L CP R L + S Sbjct: 918 FSVSNLCRKCGGKKETMSHALVNCPMMQTLINERHDALEISLVQILSS 965 >tr:Q8LMT3_ORYSA Putative retroelement. Oryza sativa (japonica cultivar-group). Length = 764 Score = 34.9 bits (79), Expect = 0.032 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 ++ SP C C G E +H++F C + Sbjct: 608 WSGSPNCKLC-GQTEDVDHLMFRCHISQFMW 637 >tr:Q7XUX8_ORYSA OSJNBa0027G07.11 protein. Oryza sativa (japonica cultivar-group). Length = 364 Score = 34.5 bits (78), Expect = 0.034 Identities = 9/28 (32%), Positives = 12/28 (42%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRL 34 CP C ETA H++ C I + Sbjct: 320 CPLCRRETETALHLVATCRYTKRIWHLI 347 >tr:Q9NBI4_9DIPT Reverse transcriptase (Fragment). Drosophila quinaria. Length = 366 Score = 34.5 bits (78), Expect = 0.036 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + +P C C E HVL CP +A++R Sbjct: 281 LSETPTCT-CGADREDWLHVLCVCPLYADVRF 311 >tr:Q515B3_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 280 Score = 34.5 bits (78), Expect = 0.039 Identities = 8/23 (34%), Positives = 11/23 (47%) Query: 7 CPRCPGAVETAEHVLFECPRFAE 29 C CP + + H+L CP E Sbjct: 252 CKHCPNTIASINHILLGCPVMKE 274 >tr:Q9XIH8_ARATH Putative non-LTR retrolelement reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 323 Score = 34.5 bits (78), Expect = 0.039 Identities = 10/27 (37%), Positives = 13/27 (48%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIR 31 VC C ET +H+ F+C EI Sbjct: 194 TVCVLCNVVDETHDHLFFQCQFSNEIW 220 >tr:Q9NBI1_9DIPT Reverse transcriptase (Fragment). Drosophila recens. Length = 359 Score = 34.5 bits (78), Expect = 0.043 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 + S C C ET EHVL EC + ++R ++ + L SD Sbjct: 280 LSDSQEC-SCGAGEETWEHVLCECVLYEDLRDLSAFGVSRQVSGGFDVSQALSTSDRVR 337 >tr:Q9NBI6_9DIPT Reverse transcriptase (Fragment). Drosophila palustris. Length = 366 Score = 34.5 bits (78), Expect = 0.044 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + +P C C E HVL CP +A++R Sbjct: 281 LSETPTCT-CGADREDWLHVLCVCPLYADMRF 311 >tr:Q7XTR4_ORYSA OSJNBb0085C12.5 protein. Oryza sativa (japonica cultivar-group). Length = 1715 Score = 34.5 bits (78), Expect = 0.044 Identities = 12/41 (29%), Positives = 18/41 (43%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPEN 47 C C E+ +H+L CP ++ LL A + P N Sbjct: 1588 CVLCDQHEESIDHILVACPESRQLWWLLLSAISRPECLPVN 1628 >tr:Q9FYK1_ARATH F21J9.30. Arabidopsis thaliana (Mouse-ear cress). Length = 1270 Score = 34.1 bits (77), Expect = 0.053 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Query: 9 RCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENL---LEWLLESDESWS 60 C E+ H LF CP +I D FS ++ + LLE+ ++ Sbjct: 1025 VCGELGESTNHTLFLCPLSRQIWALSDYPFPPDGFSNGSIYSNINHLLENKDNKE 1079 >tr:Q76IN9_CIOIN Reverse transcriptase (Fragment). Ciona intestinalis. Length = 779 Score = 34.1 bits (77), Expect = 0.057 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRR 33 + C C VET H+L CPR R R Sbjct: 631 TTDCDSC-HRVETLSHILQSCPRTHGPRIR 659 >tr:Q7XU53_ORYSA OSJNBa0006A01.18 protein. Oryza sativa (Rice). Length = 1189 Score = 33.7 bits (76), Expect = 0.059 Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSP 45 + + CP C ETA H++ C I R + P Sbjct: 1061 WRNNGHCPLCRCDTETAFHLVAMCRYTKRIWRLVATWAGYQQLEP 1105 >tr:Q5N7N0_ORYSA Cyst nematode resistance protein-like protein. Oryza sativa (japonica cultivar-group). Length = 165 Score = 33.7 bits (76), Expect = 0.061 Identities = 9/31 (29%), Positives = 14/31 (45%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 P+C C +E H+L +CP + L Sbjct: 47 DPLCALCSIDMEDCHHLLVKCPYTNRVWSLL 77 >tr:Q54S56_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q54X36_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 980 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 817 CQQC-GEDETSEHIFFNCKAH 836 >tr:Q54ZT3_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q556X2_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q55CH5_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q55E47_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q55EZ2_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 1047 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 884 CQQC-GEDETSEHIFFNCKAH 903 >tr:Q6YTX0_ORYSA Hypothetical protein OSJNBb0018L13.19. Oryza sativa (japonica cultivar-group). Length = 63 Score = 33.7 bits (76), Expect = 0.062 Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAE 29 +CP C ETA H+L +C + Sbjct: 1 MDSHSMCPFCAQEEETANHILIDCVFARQ 29 >tr:Q9NBI7_9DIPT Reverse transcriptase (Fragment). Drosophila orientacea. Length = 358 Score = 33.7 bits (76), Expect = 0.062 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + + C C + ET EHVL ECP + ++R Sbjct: 280 LSDTQECH-CGLSEETWEHVLCECPSYEDLR 309 >tr:Q9NBJ2_9DIPT Reverse transcriptase (Fragment). Drosophila curvispina. Length = 353 Score = 33.7 bits (76), Expect = 0.062 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + +P C C E HVL CP +A++R Sbjct: 268 LSETPAC-ACGAEREDWLHVLCVCPLYADLRF 298 >tr:Q7G6D1_ORYSA Putative non-LTR retroelement reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 362 Score = 33.7 bits (76), Expect = 0.067 Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 6/58 (10%) Query: 3 PSPVCPRCPGAV-ETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 C C G + ET H+ F CP + L ++ + Sbjct: 244 DDLTCVLCYGDLRETKLHIFFACPYSLRCWQLLGFHW-----FLNLNFFQMVVLARNR 296 >tr:Q8SAZ6_ORYSA Putative non-LTR retroelement reverse transcriptase. Oryza sativa (Rice). Length = 362 Score = 33.7 bits (76), Expect = 0.067 Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 6/58 (10%) Query: 3 PSPVCPRCPGAV-ETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 C C G + ET H+ F CP + L ++ + Sbjct: 244 DDLTCVLCYGDLRETKLHIFFACPYSLRCWQLLGFHW-----FLNLNFFQMVVLARNR 296 >tr:Q9NBH9_9DIPT Reverse transcriptase (Fragment). Drosophila testacea. Length = 358 Score = 33.7 bits (76), Expect = 0.068 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + + C C + ET EHVL ECP + ++R Sbjct: 280 LSDTQECH-CGLSEETWEHVLCECPSYEDLR 309 >tr:Q76IK4_CIOIN Pol-like protein. Ciona intestinalis. Length = 1263 Score = 33.7 bits (76), Expect = 0.069 Identities = 8/31 (25%), Positives = 11/31 (35%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 + VC C ET H+ EC + Sbjct: 1138 TDVCTFCGVNKETIYHLFCECKHVQVYWESV 1168 >tr:Q76B34_FUGRU Reverse transcriptase. Fugu rubripes (Japanese pufferfish) (Takifugu rubripes). Length = 1154 Score = 33.7 bits (76), Expect = 0.070 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 1 FAPSPVCPR--CPGAVETAEHVLFECPRFAEIR 31 A CPR C GA E+ H+L+EC + Sbjct: 1001 MAAHATCPRPGC-GAPESVRHLLWECSAAKDQW 1032 >tr:Q7XKF7_ORYSA OSJNBb0065J09.12 protein. Oryza sativa (Rice). Length = 436 Score = 33.7 bits (76), Expect = 0.071 Identities = 9/41 (21%), Positives = 12/41 (29%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 CP C ET H++ C I + P Sbjct: 313 HCPLCRCEAETGLHLVATCRYTKRIWHHVAGWVGYHQLEPS 353 >tr:Q9NBI5_9DIPT Reverse transcriptase (Fragment). Drosophila palustris. Length = 359 Score = 33.7 bits (76), Expect = 0.072 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 + S C C ET EHVL EC + ++R ++ + L S Sbjct: 280 LSDSQEC-FCGAGEETWEHVLCECVLYEDLRDLSAFGVTRQVSGGFDVSQALSTS 333 >tr:Q9NBI9_9DIPT Reverse transcriptase (Fragment). Drosophila neotestacea. Length = 358 Score = 33.7 bits (76), Expect = 0.073 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 + + C C + ET EHVL ECP + ++R Sbjct: 280 LSDTQECH-CGLSEETWEHVLCECPSYEDLR 309 >tr:Q57GT8_SALCH Putative alkylphosphonate uptake protein in phosphonate metabolism. Salmonella cholerae-suis (Salmonella enterica). Length = 111 Score = 33.4 bits (75), Expect = 0.081 Identities = 14/54 (25%), Positives = 22/54 (40%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDES 58 P CP+C ++ +F CP A PA D+ ++ LL +S Sbjct: 4 PHCPQCNSEYTYEDNGMFICPECAHEWNDAEPAQESDELIVKDANGNLLADGDS 57 >tr:Q5PJ10_SALPA Hypothetical protein phnA. Salmonella paratyphi-a. Length = 111 Score = 33.4 bits (75), Expect = 0.081 Identities = 14/54 (25%), Positives = 22/54 (40%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDES 58 P CP+C ++ +F CP A PA D+ ++ LL +S Sbjct: 4 PHCPQCNSEYTYEDNGMFICPECAHEWNDAEPAQESDELIVKDANGNLLADGDS 57 >tr:Q7CPA4_SALTY Putative alkylphosphonate uptake protein in phosphonate metabolism. Salmonella typhimurium. Length = 111 Score = 33.4 bits (75), Expect = 0.081 Identities = 14/54 (25%), Positives = 22/54 (40%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDES 58 P CP+C ++ +F CP A PA D+ ++ LL +S Sbjct: 4 PHCPQCNSEYTYEDNGMFICPECAHEWNDAEPAQESDELIVKDANGNLLADGDS 57 >tr:Q8XGQ5_SALTI Hypothetical protein phnA (Hypothetical protein STY4488). Salmonella typhi. Length = 111 Score = 33.4 bits (75), Expect = 0.081 Identities = 14/54 (25%), Positives = 22/54 (40%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDES 58 P CP+C ++ +F CP A PA D+ ++ LL +S Sbjct: 4 PHCPQCNSEYTYEDNGMFICPECAHEWNDAEPAQESDELIVKDANGNLLADGDS 57 >tr:Q6AVS1_ORYSA Hypothetical protein OSJNBa0075M12.1. Oryza sativa (japonica cultivar-group). Length = 704 Score = 33.4 bits (75), Expect = 0.081 Identities = 8/23 (34%), Positives = 11/23 (47%) Query: 1 FAPSPVCPRCPGAVETAEHVLFE 23 CP C +ETA H+L + Sbjct: 480 IDSHSTCPFCAQELETANHILLD 502 >tr:Q67TV5_ORYSA Nuclear transport factor 2 (NTF2)-like protein. Oryza sativa (japonica cultivar-group). Length = 331 Score = 33.4 bits (75), Expect = 0.083 Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEI 30 PVC C ET H+ C ++ Sbjct: 260 PVCHLCSQDRETCAHIFLSCRYTQQV 285 >tr:Q8SA91_MAIZE Putative gag-pol polyprotein. Zea mays (Maize). Length = 2396 Score = 33.4 bits (75), Expect = 0.089 Identities = 7/31 (22%), Positives = 10/31 (32%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRL 34 +C C A E H+ C + L Sbjct: 2329 DTMCEVCGRAPEDTTHIFLHCGFASSFWGAL 2359 >tr:Q54NQ3_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 372 Score = 33.4 bits (75), Expect = 0.095 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 209 CQQC-GEDETSEHIFFNCKAH 228 >tr:Q55EE5_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 539 Score = 33.4 bits (75), Expect = 0.095 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 376 CQQC-GEDETSEHIFFNCKAH 395 >tr:Q53PH7_ORYSA Retrotransposon protein, putative, unclassified. Oryza sativa (japonica cultivar-group). Length = 849 Score = 33.4 bits (75), Expect = 0.097 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Query: 1 FAPSPVCPRCPGAVETAEHVLFEC 24 + P+C C GA E +H++F+C Sbjct: 789 WNGDPLCKLC-GAEEDVDHLMFKC 811 >tr:Q8S126_ORYSA Hypothetical protein P0415A04.25. Oryza sativa (japonica cultivar-group). Length = 238 Score = 33.0 bits (74), Expect = 0.10 Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 A S CP C E EH+ C A I Sbjct: 109 LAASARCPFCSS-DEDVEHLFLRCAEVATIWH 139 >tr:Q54TS9_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 372 Score = 33.0 bits (74), Expect = 0.10 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 209 CQQC-GEDETSEHIFFNCKAH 228 >tr:Q54SL0_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 372 Score = 33.0 bits (74), Expect = 0.11 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 209 CQQC-GEDETSEHIFFNCKAH 228 >tr:Q9SYH7_ARATH Putative transposon protein. Arabidopsis thaliana (Mouse-ear cress). Length = 407 Score = 33.0 bits (74), Expect = 0.11 Identities = 12/54 (22%), Positives = 19/54 (35%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLE 54 P CPRC E+ + LF P R G +N+ + + + Sbjct: 332 MRIDPGCPRCRRENESINYTLFIFPFATMACRLADSQIYGSTLISDNIEDNISK 385 >tr:Q5ZE20_ORYSA Hypothetical protein P0410E03.6. Oryza sativa (japonica cultivar-group). Length = 121 Score = 33.0 bits (74), Expect = 0.12 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%) Query: 8 PRCPGAVETAEHVL-FECPRFAEIRRRLLPAGVGDDFSP---ENLLEW 51 P C +ETA H+L C +I R+L SP L W Sbjct: 17 PFCAQELETANHILTLNCVFTRQIWLRVLSLFGWAALSPPHGSWLQSW 64 >tr:Q54SC7_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 374 Score = 33.0 bits (74), Expect = 0.12 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 211 CQQC-GEDETSEHIFFNCKAH 230 >tr:O46185_DROSU Putative reverse transcriptase (Fragment). Drosophila subobscura (Fruit fly). Length = 675 Score = 33.0 bits (74), Expect = 0.12 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 4/31 (12%) Query: 7 CPRC--PGAVETAEHVLFECPRFAEIRRRLL 35 C C ET EH+ CP + RRRL Sbjct: 614 CRSCRDEDEEETVEHLFCSCPALS--RRRLQ 642 >tr:Q8LJX1_SORBI Putative reverse transcriptase. Sorghum bicolor (Sorghum) (Sorghum vulgare). Length = 1998 Score = 33.0 bits (74), Expect = 0.12 Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%) Query: 4 SPVCPRC-PGAVETAEHVLFECPRFAEIRRRL 34 S C C + ET H+ C + + L Sbjct: 1880 SYNCVLCLQNSEETTSHLFLHCAYARQCWQLL 1911 >tr:Q9NBI3_9DIPT Reverse transcriptase (Fragment). Drosophila quinaria. Length = 359 Score = 33.0 bits (74), Expect = 0.12 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLES 55 + S C C ET EHVL EC + ++R ++ + L S Sbjct: 280 LSDSQEC-SCGAGEETWEHVLCECVLYEDLRDLSAFGVSRQVSGGFDVSQALSTS 333 >tr:Q6XMP6_AEDAL Reverse transcriptase (Fragment). Aedes albopictus (Forest day mosquito). Length = 248 Score = 33.0 bits (74), Expect = 0.12 Identities = 12/23 (52%), Positives = 14/23 (60%) Query: 1 FAPSPVCPRCPGAVETAEHVLFE 23 A SP+CP C ET HV+FE Sbjct: 226 HASSPLCPECVNVEETPAHVVFE 248 >tr:Q54PS6_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 225 Score = 32.6 bits (73), Expect = 0.13 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 62 CQQC-GEDETSEHIFFNCKAH 81 >tr:Q9P8H7_CANAL Reverse transcriptase. Candida albicans (Yeast). Length = 1149 Score = 32.6 bits (73), Expect = 0.14 Identities = 8/27 (29%), Positives = 12/27 (44%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRR 33 C C ++ H +FEC E+ R Sbjct: 1062 CQLCNTGTDSIVHHIFECGETMELWSR 1088 >tr:Q76B32_TETNG Reverse transcriptase. Tetraodon nigroviridis (Green puffer). Length = 1119 Score = 32.6 bits (73), Expect = 0.14 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 1 FAPSPVCPR--CPGAVETAEHVLFECPRFAEIR 31 A CPR C GA E+ H+L+EC + Sbjct: 1001 MAAHSTCPRPGC-GAPESVRHLLWECSAAVDQW 1032 >tr:Q50S16_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 225 Score = 32.6 bits (73), Expect = 0.15 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 7 CPLCKDKIATVEHILLSC 24 >tr:Q50WA1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 78 Score = 32.6 bits (73), Expect = 0.15 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 24 CPLCKDKIATVEHILLSC 41 >tr:Q512P9_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 198 Score = 32.6 bits (73), Expect = 0.15 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 24 CPLCKDKIATVEHILLSC 41 >tr:Q51F82_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 524 Score = 32.6 bits (73), Expect = 0.15 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 361 CPLCKDKIATVEHILLSC 378 >tr:Q6ZIA0_ORYSA Cyst nematode resistance protein-like. Oryza sativa (japonica cultivar-group). Length = 158 Score = 32.6 bits (73), Expect = 0.16 Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 4 SPVCPRCPGAVETAEHVLFECPRFAEIRRRLL 35 C C +E+ H+L +CP + R L+ Sbjct: 82 DASCGLCNAEMESCNHLLMKCPLTNRVWRMLM 113 >tr:Q6Z698_ORYSA Cyst nematode resistance protein-like. Oryza sativa (japonica cultivar-group). Length = 175 Score = 32.6 bits (73), Expect = 0.17 Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIR 31 +CP C ET H+L EC + Sbjct: 146 ICPLCRRTQETTLHLLAECRYTRRVW 171 >tr:Q50MS1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 223 Score = 32.2 bits (72), Expect = 0.17 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 7 CPRCPGAVETAEHVLFEC 24 CP C + T EH+L C Sbjct: 159 CPLCKDKIATVEHILLSC 176 >tr:Q9LQJ0_ARATH F28G4.15 protein (Hypothetical protein). Arabidopsis thaliana (Mouse-ear cress). Length = 272 Score = 32.2 bits (72), Expect = 0.17 Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 27 FAEIRRRLLPAGVGDDFSPENLLEWLLESDE 57 A I RLLP F ++LLEW+ + Sbjct: 1 MAGIWTRLLPVRRLSSFFSKSLLEWIYANLG 31 >tr:Q54BV4_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 186 Score = 32.2 bits (72), Expect = 0.17 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 23 CQQC-GEDETSEHIFFNCKAH 42 >tr:Q76IK2_ANOGA Pol-like protein. Anopheles gambiae (African malaria mosquito). Length = 1077 Score = 32.2 bits (72), Expect = 0.17 Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 1/59 (1%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESW 59 PSP C C A++T EH C R A+ + L + L Sbjct: 979 RVPSPSCSFC-SAIDTLEHKFAGCRRVADAWQILHQRISVVISGCPSSSTLLFGLLRLP 1036 >tr:Q76IM9_CIOIN Reverse transcriptase. Ciona intestinalis. Length = 1540 Score = 32.2 bits (72), Expect = 0.17 Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 3 PSPVCPRCPGAVETAEHVLFECP 25 P +C RC +VE+ HVL CP Sbjct: 1378 PDILCRRCGASVESLPHVLNHCP 1400 >tr:Q54VY5_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 186 Score = 32.2 bits (72), Expect = 0.19 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 23 CQQC-GEDETSEHIFFNCKAH 42 >tr:O96303_TRIVA Translation initiation factor 2 gamma subunit (Fragment). Trichomonas vaginalis. Length = 211 Score = 32.2 bits (72), Expect = 0.20 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%) Query: 3 PSPVCPRCPGAVETAEHVLF-ECP 25 P CP C +E HV F +CP Sbjct: 63 TDPRCPHCSSPIELIRHVSFVDCP 86 >tr:Q54KC5_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 186 Score = 32.2 bits (72), Expect = 0.20 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 23 CQQC-GEDETSEHIFFNCKAH 42 >tr:Q54CF1_DICDI Hypothetical protein (Fragment). Dictyostelium discoideum (Slime mold). Length = 185 Score = 32.2 bits (72), Expect = 0.22 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 22 CQQC-GEDETSEHIFFNCKAH 41 >tr:Q51HC1_MAGGR Hypothetical protein. Magnaporthe grisea 70-15. Length = 851 Score = 31.8 bits (71), Expect = 0.22 Identities = 12/44 (27%), Positives = 18/44 (40%) Query: 19 HVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRI 62 H+L CP F + +L P+ + L +D SRI Sbjct: 4 HLLINCPIFKQTIHQLEDVLRECPTPPDWTISQELSADAENSRI 47 >tr:Q7XMG7_ORYSA OSJNBa0028I23.15 protein. Oryza sativa (japonica cultivar-group). Length = 593 Score = 31.8 bits (71), Expect = 0.22 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 8/44 (18%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPR-------FAEIRRRLLPA 37 + S C C ET +++ F+CP +A + LL Sbjct: 513 WKGSLRCCFCRSH-ETIQYLFFDCPMVIFRGTHWARLWSLLLKE 555 >tr:Q7XR08_ORYSA OSJNBa0015K02.4 protein (OSJNBa0011F23.17 protein). Oryza sativa (japonica cultivar-group). Length = 192 Score = 31.8 bits (71), Expect = 0.22 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 3/53 (5%) Query: 11 PGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWSRIQ 63 G +E H+ ECP ++ R + F + + LL W Sbjct: 76 TGNLEIVRHLFMECPFTQQVWRDIGRKIRLSRFLNMTIDDTLL---NWWREQT 125 >tr:Q551M1_DICDI Hypothetical protein. Dictyostelium discoideum (Slime mold). Length = 186 Score = 31.8 bits (71), Expect = 0.23 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C +C G ET+EH+ F C Sbjct: 23 CQQC-GEDETSEHIFFNCKAH 42 >tr:Q94DG5_ORYSA Hypothetical protein P0518C01.27 (Hypothetical protein P0698H10.1). Oryza sativa (japonica cultivar-group). Length = 110 Score = 31.8 bits (71), Expect = 0.23 Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 13 AVETAEHVLFECPRFAEIR 31 +ETA H+L +C ++ Sbjct: 92 ELETANHILLDCVFARQVW 110 >tr:Q7X7T7_ORYSA OSJNBa0084K20.4 protein (OSJNBa0076N16.2 protein). Oryza sativa (japonica cultivar-group). Length = 181 Score = 31.8 bits (71), Expect = 0.23 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 6 VCPRCPGAVETAEHVLFEC--PRFAEIRRRLLPAGVGDDFSPENLLEWLLESDESWS 60 CP C ++TA H+LF+C R+ + A + + L S W Sbjct: 83 GCPFCVQDLDTANHILFDCMFARWFQDWWSSFRACLPEHLYDSFDSLVFLVSWRLWK 139 >tr:Q9S9V5_ARATH T19J18.5 protein (AT4g04650 protein). Arabidopsis thaliana (Mouse-ear cress). Length = 332 Score = 31.8 bits (71), Expect = 0.25 Identities = 7/32 (21%), Positives = 12/32 (37%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + C C ++ H+ FEC + R Sbjct: 165 LSIPAECLLCNAHDDSRAHLFFECQFSGVVWR 196 >tr:Q7XX00_ORYSA OSJNBa0079F16.5 protein. Oryza sativa (Rice). Length = 153 Score = 31.8 bits (71), Expect = 0.26 Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGVGDDFSPE 46 VC C E EH+ C + R++ +G F Sbjct: 32 VCQLCLVVDEDYEHLFVSCTYTTRVW-RMIKGWIGVGFLLP 71 >tr:Q59KQ0_CANAL Polyprotein of L1-like non-LTR retrotransposon Zorro 3. Candida albicans SC5314. Length = 1149 Score = 31.8 bits (71), Expect = 0.27 Identities = 7/27 (25%), Positives = 12/27 (44%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRR 33 C C ++ H +FEC E+ + Sbjct: 1062 CQLCNTGTDSIVHHIFECGETMELWSK 1088 >tr:Q84M62_ORYSA Hypothetical protein OSJNBa0059G06.21. Oryza sativa (japonica cultivar-group). Length = 207 Score = 31.8 bits (71), Expect = 0.27 Identities = 8/28 (28%), Positives = 11/28 (39%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRL 34 C C ETA H++ C I + Sbjct: 134 CALCRRETETALHLVATCRYTKRIWHLI 161 >tr:Q50PB9_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 283 Score = 31.4 bits (70), Expect = 0.29 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 220 CKHCPNTIASIIHILLGCPVM 240 >tr:Q5TT89_ANOGA ENSANGP00000020605 (Fragment). Anopheles gambiae str. PEST. Length = 541 Score = 31.4 bits (70), Expect = 0.34 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLL 35 + P+C C + T H+L EC + ++R Sbjct: 476 RSSPPLCQFCGTTI-TIFHLLTECHGYTQLRNTCN 509 >tr:Q9NBI2_9DIPT Reverse transcriptase (Fragment). Drosophila recens. Length = 366 Score = 31.4 bits (70), Expect = 0.35 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + +P C C E H L CP +A++R Sbjct: 281 LSETPTC-SCGADREDWLHDLCVCPLYADMRF 311 >tr:Q9NBJ1_9DIPT Reverse transcriptase (Fragment). Drosophila falleni. Length = 366 Score = 31.4 bits (70), Expect = 0.35 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRR 32 + + C C E HVL CP +A++R Sbjct: 281 LSETTAC-ACGADREDWLHVLCVCPLYADLRF 311 >tr:Q9GP60_DROME Pol protein. Drosophila melanogaster (Fruit fly). Length = 1227 Score = 31.0 bits (69), Expect = 0.39 Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAG 38 + P C C + T +H+L C + IR L Sbjct: 1163 RSARPTCQLCGDEL-TVDHILNACSQLHSIRSHLFGTH 1199 >tr:Q9ZQX2_ARATH Putative reverse transcriptase. Arabidopsis thaliana (Mouse-ear cress). Length = 543 Score = 31.0 bits (69), Expect = 0.41 Identities = 7/20 (35%), Positives = 9/20 (45%) Query: 5 PVCPRCPGAVETAEHVLFEC 24 C C ET +H+ F C Sbjct: 494 AECVLCNLVDETRDHLFFAC 513 >tr:Q5TT90_ANOGA ENSANGP00000006819 (Fragment). Anopheles gambiae str. PEST. Length = 516 Score = 31.0 bits (69), Expect = 0.41 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIRRRLL 35 + P+C C + T H+L EC + ++R Sbjct: 451 RSSPPLCQFCGTTI-TIFHLLTECHGYTQLRNTCN 484 >tr:Q50MD5_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 155 Score = 31.0 bits (69), Expect = 0.46 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 111 CKYCPNTIASIIHILLGCPVM 131 >tr:Q7F2K5_ORYSA OSJNBb0008G24.5 protein. Oryza sativa (japonica cultivar-group). Length = 451 Score = 30.7 bits (68), Expect = 0.52 Identities = 8/24 (33%), Positives = 11/24 (45%) Query: 15 ETAEHVLFECPRFAEIRRRLLPAG 38 ET H+L CP EI + + Sbjct: 163 ETNMHLLLLCPYAHEIWKTYVKHM 186 >tr:Q7XXJ4_ORYSA OSJNBa0094O15.6 protein. Oryza sativa (japonica cultivar-group). Length = 699 Score = 30.7 bits (68), Expect = 0.55 Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 8/62 (12%) Query: 9 RCPGAVETAEHVLFECPRFAEIR--------RRLLPAGVGDDFSPENLLEWLLESDESWS 60 C A E A H+ ECP + +L + + S + ++ + Sbjct: 592 LCNSAFEDAAHLAKECPFTVTVWTQICIWMNFQLPQHHLQGNLSDWWSSFCTISPRQNRN 651 Query: 61 RI 62 ++ Sbjct: 652 KV 653 >tr:Q24363_DROME Putative ORF2. Drosophila melanogaster (Fruit fly). Length = 1219 Score = 30.7 bits (68), Expect = 0.55 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRL----LPAGVGDDFSPENLLEWLLES 55 P CP C G + + H+ CP + ++ + P + +P+N+ + +L Sbjct: 1157 PTCPFCQGDI-SLNHIFNSCPSLLQTKQDIFNNTNPLDLLSKPNPDNIQKLILFL 1210 >tr:Q76IL9_BRARE Pol-like protein. Brachydanio rerio (Zebrafish) (Danio rerio). Length = 1267 Score = 30.7 bits (68), Expect = 0.55 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 4/59 (6%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRRLLPAG-VGDDFSPENLLEWLLESDESWSRIQ 63 CP C ET H+ C R +L + + +L + + +++ Sbjct: 1167 GCPFCNMG-ETVFHLFLNCSRLEMFLYQLNGYCQMLGEVFTPSLF--IYGPKYNRNKMH 1222 >tr:Q8LM65_ORYSA Putative non-LTR retroelement reverse transcriptase. Oryza sativa (japonica cultivar-group). Length = 1345 Score = 30.7 bits (68), Expect = 0.56 Identities = 8/28 (28%), Positives = 12/28 (42%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRR 33 +C C A E A H+ EC + + Sbjct: 1318 ICSLCTEAFEDANHLAKECSFTILVWNQ 1345 >tr:Q76IN3_ENTHI Reverse transcriptase. Entamoeba histolytica. Length = 801 Score = 30.7 bits (68), Expect = 0.59 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 638 CKHCPNTIASISHILLGCPVM 658 >tr:Q51AK7_ENTHI Reverse transcriptase, putative. Entamoeba histolytica HM-1:IMSS. Length = 621 Score = 30.7 bits (68), Expect = 0.59 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 535 CKHCPNTIASISHILLGCPVM 555 >tr:Q513T4_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 173 Score = 30.7 bits (68), Expect = 0.61 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 18 CKHCPNTIASISHILLGCPVM 38 >tr:Q50LJ1_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 280 Score = 30.7 bits (68), Expect = 0.63 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 225 CKHCPNTIASISHILLGCPVM 245 >tr:Q7X970_ORYSA BZIP-like protein. Oryza sativa (japonica cultivar-group). Length = 2367 Score = 30.3 bits (67), Expect = 0.66 Identities = 7/31 (22%), Positives = 12/31 (38%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR 31 S +C C E H L C + +++ Sbjct: 1810 LEQSDMCQICDRENEDDAHALCRCIQASQLW 1840 >tr:Q51GQ8_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 279 Score = 30.3 bits (67), Expect = 0.67 Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 8/51 (15%) Query: 7 CPRCPGAVETAEHVLFECPRF--------AEIRRRLLPAGVGDDFSPENLL 49 C C + + H+L CP + +++ + F+ + + Sbjct: 97 CKHCHNTIASINHILLGCPVMKKNQISKHDYVYKQIFKHLLTTHFNEFDAI 147 >tr:Q75M12_ORYSA Hypothetical protein P0676G05.2 (Hypothetical protein P0431G05.11). Oryza sativa (japonica cultivar-group). Length = 1936 Score = 30.3 bits (67), Expect = 0.67 Identities = 9/35 (25%), Positives = 10/35 (28%) Query: 5 PVCPRCPGAVETAEHVLFECPRFAEIRRRLLPAGV 39 VC C E A H L C + L Sbjct: 1720 DVCGICDREKEDAGHALCRCVHANSLWVNLEKGKY 1754 >tr:Q8H313_ORYSA Hypothetical protein P0710F09.110. Oryza sativa (japonica cultivar-group). Length = 195 Score = 30.3 bits (67), Expect = 0.68 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 7/56 (12%) Query: 1 FAPSPVCPRCPGAVETAEHVLFECPRFAEIR-------RRLLPAGVGDDFSPENLL 49 S VC C E H L+ CP RR+LP+G+ +P L Sbjct: 34 LEVSNVCSICGVETEDTGHALYRCPHACLFWEAMGVDLRRVLPSGIAAGSTPGILD 89 >tr:Q76IN1_TETNG Reverse transcriptase. Tetraodon nigroviridis (Green puffer). Length = 967 Score = 30.3 bits (67), Expect = 0.68 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 4 SPVCPRCPGAVETAEHVLFECP 25 SP CP C G T EH+L CP Sbjct: 741 SPSCPLCQGR-GTLEHILSSCP 761 >tr:Q7T1J8_TETNG Polyprotein. Tetraodon nigroviridis (Green puffer). Length = 1112 Score = 30.3 bits (67), Expect = 0.69 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 4 SPVCPRCPGAVETAEHVLFECP 25 SP CP C G T EH+L CP Sbjct: 886 SPSCPLCQGR-GTLEHILSSCP 906 >tr:Q7Q8Q2_ANOGA ENSANGP00000017936. Anopheles gambiae str. PEST. Length = 268 Score = 30.3 bits (67), Expect = 0.78 Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRR 33 VC C H + +CP A++R+ Sbjct: 216 VCHFCQEE----GHFILDCPLMADVRKD 239 >tr:Q8HCR0_ORYSA Orf258 protein. Oryza sativa (japonica cultivar-group). Length = 258 Score = 30.3 bits (67), Expect = 0.80 Identities = 12/55 (21%), Positives = 15/55 (27%), Gaps = 3/55 (5%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIR---RRLLPAGVGDDFSPENLLEWLLESDES 58 CP C ET H L EC + L + + L S Sbjct: 138 CPLCGNDNETKFHALVECEHAKLFWSAAQDLFDLKMPRLNPATWSRDVLDADIMS 192 >tr:Q50PR0_ENTHI Hypothetical protein. Entamoeba histolytica HM-1:IMSS. Length = 180 Score = 29.9 bits (66), Expect = 0.91 Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 7 CPRCPGAVETAEHVLFECPRF 27 C CP + + H+L CP Sbjct: 18 CKHCPNTIASISHILLGCPVM 38 >tr:Q8W5F7_ORYSA Hypothetical protein OSJNBb0008A05.6. Oryza sativa (Rice). Length = 376 Score = 29.9 bits (66), Expect = 0.92 Identities = 9/29 (31%), Positives = 12/29 (41%) Query: 7 CPRCPGAVETAEHVLFECPRFAEIRRRLL 35 CP C E+A H+L C I + Sbjct: 348 CPLCRVTQESAVHLLTSCRVTCRIWEEIQ 376 >tr:Q76IN5_ANOGA Reverse transcriptase. Anopheles gambiae (African malaria mosquito). Length = 1209 Score = 29.9 bits (66), Expect = 0.99 Identities = 9/23 (39%), Positives = 12/23 (52%) Query: 7 CPRCPGAVETAEHVLFECPRFAE 29 C +C E+ EHV+ CP A Sbjct: 1017 CRKCNSGGESIEHVIAGCPVLAG 1039 >tr:Q7Q8Q3_ANOGA ENSANGP00000017908. Anopheles gambiae str. PEST. Length = 268 Score = 29.9 bits (66), Expect = 1.00 Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 6 VCPRCPGAVETAEHVLFECPRFAEIRRR 33 VC C H + CP A++R+ Sbjct: 216 VCHFCQEE----GHFIRNCPLMADVRKD 239 Database: /export/scratch/database/MYHITS2/tr.66 Posted date: Jun 13, 2005 6:40 PM Number of letters in database: 567,248,508 Number of sequences in database: 1,779,481 Lambda K H 0.315 0.148 0.475 Lambda K H 0.267 0.0444 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,832,485 Number of Sequences: 1779481 Number of extensions: 2451666 Number of successful extensions: 7123 Number of sequences better than 1.0: 295 Number of HSP's better than 1.0 without gapping: 241 Number of HSP's successfully gapped in prelim test: 54 Number of HSP's that attempted gapping in prelim test: 6848 Number of HSP's gapped (non-prelim): 297 length of query: 63 length of database: 16,252,624 effective HSP length: 5 effective length of query: 58 effective length of database: 16,252,624 effective search space: 942652192 effective search space used: 942652192 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 66 (29.9 bits)