SIB BLAST network server version 1.6 of November 26, 2002 compiled by GNU C version 3.2.3 20030502 (Red Hat Linux 3.2.3-49) compiled on Feb 1 2005. Welcome to the SIB BLAST Network Service (noko01) ============================================================================== Swiss Institute of Bioinformatics (SIB) Ludwig Institute for Cancer Research (LICR) Swiss Institute for Experimental Cancer Research (ISREC) ============================================================================== If results of this search are reported or published, please mention that the computation was performed at the SIB using the BLAST network service. PEPTIDE SEQUENCE DATABASES swiss SwissProt + updates 14-Jul-2004 swisstrembl SwissProt+Trembl+TrUpdates 14-Jul-2004 nr Non-redundant SP+Trembl+TrUpdates+gp 14-Jul-2004 shuffled SwissProt r30 shuffled in windows of 20 aa yeast S.cerevisiae translated genome ORFs NUCLEOTIDE SEQUENCE DATABASES embre * EMBL Data Library, Release 79, June 2004 embu * EmblUpdate 14-Jul-2004 embl * EMBL+EmblUpdate 14-Jul-2004 nr * Synonym to embl (and actually redundant). 14-Jul-2004 EST Database of Expressed Sequence Tags 14-Jul-2004 GSS Genome Survey Sequences 14-Jul-2004 HTG High-thruput Genomic Sequences 14-Jul-2004 STS Database of Sequence Tagged Sites 14-Jul-2004 repbase Repbase, August 04, 2002 simple Simple sequence repeats (J. Mol. Evol. 40:120, 1995) yeast S.cerevisiae genome worm C.elegans genome * The est, gss, htg, and sts divisions of EMBL are excluded from these databases. ============================================================================ The BLAST Network Service uses a server developed at SIB and the NCBI BLAST 2 software. For problems regarding this site, please contact one of the following persons: - problems with the programs: Christian Iseli (Christian.Iseli@licr.org) Giovanna Ambrosini (giovanna.ambrosini@isb-sib.ch) - problems with the databases: Victor Jongeneel (Victor.Jongeneel@isb-sib.ch) Laurent Falquet (Laurent.Falquet@isrec.unil.ch) ============================================================================ BLASTP 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= consensus (98 letters) Database: /export/scratch/database/MYHITS2/ens.14 473,687 sequences; 222,839,780 total letters [blastpgp] WARNING: posFindAlignmentDimensions: Attempting to recover data from multiple alignment file [blastpgp] WARNING: posProcessAlignment: Alignment recovered successfully Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ens:ENSP00000173898 >ENSP00000173898 pep:known chromosome:NCBI35... 59 3e-09 ens:C01C4.1 >C01C4.1 pep:known chromosome:CEL140:X:3727560:37284... 52 3e-07 ens:ENSP00000257622 >ENSP00000257622 pep:ccds chromosome:NCBI35:... 48 3e-06 ens:ENSP00000351124 >ENSP00000351124 pep:ccds chromosome:NCBI35:... 48 3e-06 ens:ENSP00000257665 >ENSP00000257665 pep:known chromosome:NCBI35... 48 5e-06 ens:ENSCBRP00000002708 >ENSCBRP00000002708 pep:known scaffold:CB... 34 0.060 ens:F46F2.2C >F46F2.2c pep:known chromosome:CEL140:X:15269137:15... 34 0.075 ens:F46F2.2A >F46F2.2a pep:known chromosome:CEL140:X:15270848:15... 34 0.088 ens:ENSPTRP00000032922 >ENSPTRP00000032922 pep:known chromosome:... 33 0.14 ens:GSTENP00037517001 >GSTENP00037517001 pep:known chromosome:TE... 33 0.18 ens:CG11295_PA >CG11295-PA pep:known chromosome:BDGP3.2.1:2R:187... 33 0.20 ens:ENSDARP00000003101 >ENSDARP00000003101 pep:novel chromosome:... 33 0.22 ens:ENSCBRP00000010647 >ENSCBRP00000010647 pep:known scaffold:CB... 32 0.30 ens:F46F2.2B >F46F2.2b pep:known chromosome:CEL140:X:15271022:15... 32 0.37 ens:CG13633_PA >CG13633-PA pep:known chromosome:BDGP3.2.1:3R:205... 32 0.39 ens:ENSCBRP00000010648 >ENSCBRP00000010648 pep:novel scaffold:CB... 31 0.54 ens:ENSRNOP00000018008 >ENSRNOP00000018008 pep:known chromosome:... 31 0.57 ens:ENSCAFP00000002027 >ENSCAFP00000002027 pep:novel chromosome:... 31 0.60 ens:GSTENP00026135001 >GSTENP00026135001 pep:known chromosome:TE... 31 0.70 ens:ENSCAFP00000019633 >ENSCAFP00000019633 pep:novel chromosome:... 30 0.75 ens:T24D8.5 >T24D8.5 pep:known chromosome:CEL140:X:2343994:23447... 30 0.79 ens:ENSCAFP00000009115 >ENSCAFP00000009115 pep:known chromosome:... 30 0.99 >ens:ENSP00000173898 >ENSP00000173898 pep:known chromosome:NCBI35:X:54830287:54840474:1 gene:ENSG00000067445 transcript:ENST00000173898 . Length = 1387 Score = 58.6 bits (186), Expect = 3e-09 Identities = 35/99 (35%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAM-DERLSFSGGLGKRKMDSP 59 FS S+S L S G+G G S F GLG A L S G+G + S Sbjct: 1184 GFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSD 1243 Query: 60 AFGFGLGKRGMDRSGFTFGLGKRGSDGRMFSGGLGKRPM 98 FG GLG G T+G S G S G+G RP Sbjct: 1244 GFGGGLGTNAS--FGSTLGTSAGFSGGLSTSDGFGSRPN 1280 Score = 39.3 bits (120), Expect = 0.002 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 3/94 (3%) Query: 2 FSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAM-DERLSFSGGLGKRKMDSPA 60 F N S++ L S G+G G S FS GL + D L S G+G S Sbjct: 1155 FGNGLSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTG 1214 Query: 61 FGFGLGKRGMDRSGFTFGLGKRGSDGRMFSGGLG 94 FG GLG +G G + S G+G Sbjct: 1215 FGGGLGT--SAGFSGGLGTSAGFGGGLVTSDGFG 1246 >ens:C01C4.1 >C01C4.1 pep:known chromosome:CEL140:X:3727560:3728422:1 gene:C01C4.1 transcript:C01C4.1 . Length = 176 Score = 52.1 bits (164), Expect = 3e-07 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 15/102 (14%) Query: 10 LLSMDDLAFSPGLGKREGDSFAFSFGLGKRA---------MDERLSFSGGLGKRKMDSPA 60 S + + D+ AF +GKR+ ++ +++MD+ A Sbjct: 75 ATSDKLYDDTKFEEMKRMDANAFRMSFGKRSDAHQAADDQVEYVNDDFSLPEQKRMDANA 134 Query: 61 FGFGLGKR------GMDRSGFTFGLGKRGSDGRMFSGGLGKR 96 F +GKR S D R + GLG+R Sbjct: 135 FRMSFGKRVNLDPNSFRMSFGKRSTVGYNLDARNYFVGLGRR 176 Score = 40.4 bits (124), Expect = 8e-04 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMDERLSFSGGLGKRKMDSPA 60 + F + LL + ++ + L KR D+ AF +GKR++ ++MD A Sbjct: 1 MKATFVLACLLVIAAVSHADLLPKR-MDANAFRMSFGKRSVSNP------AEAKRMDPNA 53 Query: 61 FGFGLGKRGMDR 72 F +GKR ++ Sbjct: 54 FRMSFGKRSAEQ 65 >ens:ENSP00000257622 >ENSP00000257622 pep:ccds chromosome:NCBI35:7:71841602:71862758:1 gene:ENSG00000196313 transcript:ENST00000257622 CCDS5542.1. Length = 984 Score = 48.3 bits (151), Expect = 3e-06 Identities = 21/122 (17%), Positives = 34/122 (27%), Gaps = 24/122 (19%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMD---------ERLSFSGGL 51 + T S + ++F G S F+ GLG+ A+ +S + Sbjct: 847 GINVATPGSSTTTGAFSFGAGQSGSTATSTPFAGGLGQNALGTTGQSTPFAFNVSSTTES 906 Query: 52 GKRKMDSPAFGFGLGKRG---------------MDRSGFTFGLGKRGSDGRMFSGGLGKR 96 + FGL + G+ GS FS G G + Sbjct: 907 KPVFGGTATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGSAALSFSIGAGSK 966 Query: 97 PM 98 Sbjct: 967 TP 968 >ens:ENSP00000351124 >ENSP00000351124 pep:ccds chromosome:NCBI35:7:71840284:71861424:1 gene:ENSG00000196313 transcript:ENST00000358357 CCDS5542.1. Length = 984 Score = 48.3 bits (151), Expect = 3e-06 Identities = 21/122 (17%), Positives = 34/122 (27%), Gaps = 24/122 (19%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMD---------ERLSFSGGL 51 + T S + ++F G S F+ GLG+ A+ +S + Sbjct: 847 GINVATPGSSTTTGAFSFGAGQSGSTATSTPFAGGLGQNALGTTGQSTPFAFNVSSTTES 906 Query: 52 GKRKMDSPAFGFGLGKRG---------------MDRSGFTFGLGKRGSDGRMFSGGLGKR 96 + FGL + G+ GS FS G G + Sbjct: 907 KPVFGGTATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGSAALSFSIGAGSK 966 Query: 97 PM 98 Sbjct: 967 TP 968 >ens:ENSP00000257665 >ENSP00000257665 pep:known chromosome:NCBI35:7:74690717:74716644:-1 gene:ENSG00000135213 transcript:ENST00000257665 . Length = 1229 Score = 48.0 bits (150), Expect = 5e-06 Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 24/122 (19%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMD---------ERLSFSGGL 51 + T S + ++F G S F+ GLG+ A+ + + Sbjct: 1092 GINVATPGSSATTGAFSFGAGQSGSTATSTPFTGGLGQNALGTTGQSTPFAFNVGSTTES 1151 Query: 52 GKRKMDSPAFGFGLGKRG---------------MDRSGFTFGLGKRGSDGRMFSGGLGKR 96 + FG + G+G GS FS G G + Sbjct: 1152 KPVFGGTATPTFGQNTPAPGVGTSGSSLSFGASSAPAQGFVGVGPFGSAAPSFSIGAGSK 1211 Query: 97 PM 98 Sbjct: 1212 TP 1213 >ens:ENSCBRP00000002708 >ENSCBRP00000002708 pep:known scaffold:CBR25:cb25.fpc3857:1309565:1310223:1 gene:ENSCBRG00000002216 transcript:ENSCBRT00000002708. Length = 171 Score = 34.3 bits (103), Expect = 0.060 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 15/96 (15%) Query: 16 LAFSPGLGKREGDSFAFSFGLGKRAMDERLSFSG--------GLGKRKMDSPAFGFGLGK 67 + D+ AF +GKR+ G +++MD+ AF +GK Sbjct: 76 YDDGKFEEAKRMDANAFRMSFGKRSAFTGSEVDGAADEEYMMEPEQKRMDANAFRMSFGK 135 Query: 68 RGM-DRSGFTFGLGKR------GSDGRMFSGGLGKR 96 R D + F +GKR G D R + GLG+R Sbjct: 136 RVNLDPNSFRMSFGKRSTVGYNGVDARNYFVGLGRR 171 >ens:F46F2.2C >F46F2.2c pep:known chromosome:CEL140:X:15269137:15273600:-1 gene:F46F2.2 transcript:F46F2.2c . Length = 494 Score = 34.0 bits (102), Expect = 0.075 Identities = 14/33 (42%), Positives = 15/33 (45%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDG 86 R + F GLGKRG FGL KR D Sbjct: 306 RDIKPDNFLMGLGKRGNLVYIIDFGLAKRYRDS 338 >ens:F46F2.2A >F46F2.2a pep:known chromosome:CEL140:X:15270848:15273645:-1 gene:F46F2.2 transcript:F46F2.2a . Length = 477 Score = 33.7 bits (101), Expect = 0.088 Identities = 14/33 (42%), Positives = 15/33 (45%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDG 86 R + F GLGKRG FGL KR D Sbjct: 306 RDIKPDNFLMGLGKRGNLVYIIDFGLAKRYRDS 338 >ens:ENSPTRP00000032922 >ENSPTRP00000032922 pep:known chromosome:CHIMP1:6:73820633:73834256:1 gene:ENSPTRG00000019267 transcript:ENSPTRT00000035614 . Length = 812 Score = 33.1 bits (99), Expect = 0.14 Identities = 10/43 (23%), Positives = 17/43 (39%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMDE 43 + T S + ++F G S F+ GLG+ A+ Sbjct: 748 GINVATPGSSTTAGAFSFGAGQSGSTATSTPFAGGLGQNALGT 790 >ens:GSTENP00037517001 >GSTENP00037517001 pep:known chromosome:TETRAODON7:Un_random:63291624:63292300:1 gene:GSTENG00037517001 transcript:GSTENT00037517001 . Length = 161 Score = 32.5 bits (97), Expect = 0.18 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 24 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 57 >ens:CG11295_PA >CG11295-PA pep:known chromosome:BDGP3.2.1:2R:18746047:18748971:1 gene:CG11295 transcript:CG11295-RA . Length = 769 Score = 32.5 bits (97), Expect = 0.20 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 1 DFSNFTSSSLLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMDERLSFSGGLGKRKMDSPA 60 D + +D L+ + K G + + +GK+A S G K + Sbjct: 386 DARHKIWRIGPDLDGLSEAERAEKYRGTAS-YVREFGKKAFGP----SSGNHKYNLRDLE 440 Query: 61 FGFGLGKRGMDRSGFTFGLGKRGSDGRMFSGGLG 94 KR MD++ T G ++ + R F LG Sbjct: 441 STPRSLKRLMDQNERTPGSVEKTTTKRSFLEMLG 474 >ens:ENSDARP00000003101 >ENSDARP00000003101 pep:novel chromosome:ZFISH4:5:25920295:25939748:1 gene:ENSDARG00000008370 transcript:ENSDART00000025326 . Length = 381 Score = 32.5 bits (97), Expect = 0.22 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 114 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 147 >ens:ENSCBRP00000010647 >ENSCBRP00000010647 pep:known scaffold:CBR25:cb25.fpc0829:2254501:2257015:-1 gene:ENSCBRG00000008662 transcript:ENSCBRT00000010647. Length = 367 Score = 31.9 bits (95), Expect = 0.30 Identities = 15/39 (38%), Positives = 17/39 (43%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGRMFSGG 92 R + F GLGKRG FGL KR D + G Sbjct: 201 RDIKPDNFLMGLGKRGNLVYIIDFGLAKRYRDSKAQHIG 239 >ens:F46F2.2B >F46F2.2b pep:known chromosome:CEL140:X:15271022:15281027:-1 gene:F46F2.2 transcript:F46F2.2b . Length = 298 Score = 31.6 bits (94), Expect = 0.37 Identities = 14/33 (42%), Positives = 15/33 (45%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDG 86 R + F GLGKRG FGL KR D Sbjct: 127 RDIKPDNFLMGLGKRGNLVYIIDFGLAKRYRDS 159 >ens:CG13633_PA >CG13633-PA pep:known chromosome:BDGP3.2.1:3R:20576909:20581437:-1 gene:CG13633 transcript:CG13633-RA . Length = 151 Score = 31.6 bits (94), Expect = 0.39 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 9/73 (12%) Query: 10 LLSMDDLAFSPGLGKREGDSFAFSFGLGKRAMDERLSFSGGLGKRKMDSPAFGFGLGKRG 69 LL+ D++A + G + ++FGLG+RA ++ G K P + FGLGKR Sbjct: 39 LLAADEMADNGGDNI-DKRVERYAFGLGRRA----YMYTNGGPGMK-RLPVYNFGLGKRS 92 Query: 70 MDRSGFTFGLGKR 82 ++FGLGKR Sbjct: 93 ---RPYSFGLGKR 102 >ens:ENSCBRP00000010648 >ENSCBRP00000010648 pep:novel scaffold:CBR25:cb25.fpc0829:2254501:2256444:-1 gene:ENSCBRG00000008662 transcript:ENSCBRT00000010648. Length = 265 Score = 31.1 bits (92), Expect = 0.54 Identities = 15/39 (38%), Positives = 17/39 (43%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGRMFSGG 92 R + F GLGKRG FGL KR D + G Sbjct: 99 RDIKPDNFLMGLGKRGNLVYIIDFGLAKRYRDSKAQHIG 137 >ens:ENSRNOP00000018008 >ENSRNOP00000018008 pep:known chromosome:RGSC3.4:7:117406620:117420764:-1 gene:ENSRNOG00000013076 transcript:ENSRNOT00000018008 . Length = 367 Score = 31.1 bits (92), Expect = 0.57 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 >ens:ENSCAFP00000002027 >ENSCAFP00000002027 pep:novel chromosome:BROADD1:10:29568957:29582149:1 gene:ENSCAFG00000001413 transcript:ENSCAFT00000002190 . Length = 367 Score = 31.1 bits (92), Expect = 0.60 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 >ens:GSTENP00026135001 >GSTENP00026135001 pep:known chromosome:TETRAODON7:Un_random:37835863:37839524:-1 gene:GSTENG00026135001 transcript:GSTENT00026135001 . Length = 430 Score = 30.8 bits (91), Expect = 0.70 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 122 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 155 >ens:ENSCAFP00000019633 >ENSCAFP00000019633 pep:novel chromosome:BROADD1:6:9631149:9655862:-1 gene:ENSCAFG00000013253 transcript:ENSCAFT00000021143 . Length = 1083 Score = 30.5 bits (90), Expect = 0.75 Identities = 15/109 (13%), Positives = 26/109 (23%), Gaps = 24/109 (22%) Query: 14 DDLAFSPGLGKREGDSFAFSFGLGKR---------AMDERLSFSGGLGKRKMDSPAFGFG 64 ++F G + F GL + ++ + + FG Sbjct: 959 GAFSFGTGQSGAAASTTPFGGGLSQSTLGAPSQSTPFAFNVASTPESKPVFGGTSTPSFG 1018 Query: 65 LGKRG---------------MDRSGFTFGLGKRGSDGRMFSGGLGKRPM 98 + G+G GS FS G G + Sbjct: 1019 QNTPAPGVGVSGSGLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKTP 1067 >ens:T24D8.5 >T24D8.5 pep:known chromosome:CEL140:X:2343994:2344721:-1 gene:T24D8.5 transcript:T24D8.5 . Length = 171 Score = 30.5 bits (90), Expect = 0.79 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Query: 20 PGLGKREGDSFAFSFGLGKRAMD--ERLSFSGGLGKRKMDSPAFGFGLGKRGMDRSGFTF 77 +GKR F GKR+MD + S + KR M +G+ GKR M F Sbjct: 61 GAMGKRSIALGRSGFRPGKRSMDNFHTVDVSDLIMKRSMAMGRLGLRPGKRSMAYGRQGF 120 Query: 78 GLGKRGSDGRMFSGGLGKRPM 98 GKR GKR M Sbjct: 121 RPGKRSMAYGRQGFRPGKRSM 141 >ens:ENSCAFP00000009115 >ENSCAFP00000009115 pep:known chromosome:BROADD1:18:30687348:30708639:-1 gene:ENSCAFG00000006059 transcript:ENSCAFT00000009819 . Length = 390 Score = 30.2 bits (89), Expect = 0.99 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 54 RKMDSPAFGFGLGKRGMDRSGFTFGLGKRGSDGR 87 R + F GLGK+G FGL K+ D R Sbjct: 102 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 135 Database: /export/scratch/database/MYHITS2/ens.14 Posted date: May 21, 2005 10:04 AM Number of letters in database: 222,839,780 Number of sequences in database: 473,687 Lambda K H 0.224 0.130 0.305 Lambda K H 0.203 0.0588 0.120 Matrix: BLOSUM45 Gap Penalties: Existence: 15, Extension: 2 Number of Hits to DB: 144,356,646 Number of Sequences: 473687 Number of extensions: 14592080 Number of successful extensions: 22458 Number of sequences better than 1.0: 588 Number of HSP's better than 1.0 without gapping: 316 Number of HSP's successfully gapped in prelim test: 359 Number of HSP's that attempted gapping in prelim test: 14176 Number of HSP's gapped (non-prelim): 4913 length of query: 98 length of database: 16,252,624 effective HSP length: 23 effective length of query: 75 effective length of database: 16,252,624 effective search space: 1218946800 effective search space used: 1218946800 T: 11 A: 40 X1: 22 ( 7.1 bits) X2: 51 (14.9 bits) X3: 85 (24.9 bits) S1: 56 (21.0 bits) S2: 90 (30.4 bits)